BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13078 (UTR included)
(3913 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1342_C1 1968 0.0
>BF14_1342_C1
Length = 1715
Score = 1968 bits (993), Expect = 0.0
Identities = 1005/1011 (99%)
Strand = Plus / Plus
Query: 86 atctactcagaagtcaattaccatttctactgatattcttaaagaaataataccagatgt 145
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 atctactcagaagtcaattaccatttctactnnnattcttaaagaaataataccagatgt 60
Query: 146 gaagccaacagagtttgaggaagtcattgaagaaacaaaacataaaagagtggaagtttc 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagccaacagagtttgaggaagtcattgaagaaacaaaacataaaagagtggaagtttc 120
Query: 206 agagaaggtagaaagaccagtattgccaaaaattgttatcgataatacagaaattgttga 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagaaggtagaaagaccagtattgccaaaaattgttatcgataatacagaaattgttga 180
Query: 266 aaatgttaaaaaggatcacaggttagatgaaagagacaaagaaaatgttaaatcgagaga 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgttaaaaaggatcacaggttagatgaaagagacaaagaaaatgttaaatcgagaga 240
Query: 326 caccaacctggcgacatcaagaaaaatatccatagtcaaagaaaatgacagtataatagc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caccaacctggcgacatcaagaaaaatatccatagtcaaagaaaatgacagtataatagc 300
Query: 386 aaggccaccaagcccaccaaggcataagcagtcaaatattctatatataactaatctagt 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggccaccaagcccaccaaggcataagcagtcaaatattctatatataactaatctagt 360
Query: 446 gagacccttcacaattctccagctaaaaaatttgttacaaaggacaggaagaataatgga 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagacccttcacaattctccagctaaaaaatttgttacaaaggacaggaagaataatgga 420
Query: 506 gaatggtttttggatggacaaaataaaatccaaatgttttgtgaaatatgaaaatgaaga 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaatggtttttggatggacaaaataaaatccaaatgttttgtgaaatatgaaaatgaaga 480
Query: 566 ccaagccatagaaacaaggcatgccctgcatggtgtaacatggcctgtgtcaaatccaaa 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaagccatagaaacaaggcatgccctgcatggtgtaacatggcctgtgtcaaatccaaa 540
Query: 626 aacattacatgtggacttctcaacagaagaagactttaataaggctcaagagaatgttgg 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacattacatgtggacttctcaacagaagaagactttaataaggctcaagagaatgttgg 600
Query: 686 aacagaaaatacacaaacttcaaccattcctggcactgtggaagattggctgcgggagca 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacagaaaatacacaaacttcaaccattcctggcactgtggaagattggctgcgggagca 660
Query: 746 agatatgaagagagagaagggagatgggcaaaaaccatgggaaaggaaagcggcgatgcg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agatatgaagagagagaagggagatgggcaaaaaccatgggaaaggaaagcggcgatgcg 720
Query: 806 agaatgggatatgggcaagaatgacaaagacaaggaagtttcaagaccagagaagatggt 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agaatgggatatgggcaagaatgacaaagacaaggaagtttcaagaccagagaagatggt 780
Query: 866 ccgagaggagagacctctcgaaaaaagaagacatcggacaccagagaggagtcctgaacc 925
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccgagaggagagacctctcgannnaagaagacatcggacaccagagaggagtcctgaacc 840
Query: 926 agcaaggaagtttaagaagaaagaagaggaagcaccagccaaattattagacgatttgtt 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agcaaggaagtttaagaagaaagaagaggaagcaccagccaaattattagacgatttgtt 900
Query: 986 cagaaaaacaaaaaccacaccctgcatctattggctaccactgtcagctgaaacaatagc 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cagaaaaacaaaaaccacaccctgcatctattggctaccactgtcagctgaaacaatagc 960
Query: 1046 agtgaaagaggaacaaaggcggcagcacatggccgagcatgagagacggtt 1096
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agtgaaagaggaacaaaggcggcagcacatggccgagcatgagagacggtt 1011
Score = 165 bits (83), Expect = 7e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1093 ggttctcattactgtccataaagacagtcaagtcagttcaaattccagataataattgct 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ggttctcattactgtccataaagacagtcaagtcagttcaaattccagataataattgct 1324
Query: 1153 taatactttataatgtattcatt 1175
|||||||||||||||||||||||
Sbjct: 1325 taatactttataatgtattcatt 1347
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 386,088
Number of extensions: 6199
Number of successful extensions: 6199
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6197
Number of HSP's successfully gapped: 2
Length of query: 3913
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3895
Effective length of database: 8,109,745
Effective search space: 31587456775
Effective search space used: 31587456775
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)