BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13085 (UTR included)
(1747 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061B1F07 1495 0.0
>BF01061B1F07
Length = 782
Score = 1495 bits (754), Expect = 0.0
Identities = 776/783 (99%), Gaps = 1/783 (0%)
Strand = Plus / Plus
Query: 583 gtgtagctttagcaatatactatcatataaaaaatagaacatccgagcgcagactcgata 642
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtgtagctttagcaatatactatcatataaaaaatagaacatccgagcgcagactcgaga 60
Query: 643 tatttgatgagaaaatgcatccattaagtaaagagggggtaaatgatgattatgacaagt 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatttgatgagaaaatgcatccattaagtaaagagggggtaaatgatgattatgacaagt 120
Query: 703 ataatccagaacacaaacagatttataaatttgtcagaacattatttaatgctgctcagt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataatccagaacacaaacagatttataaatttgtcagaacattatttaatgctgctcagt 180
Query: 763 taacagcagagtgcgctataattacattagtttacttggagagacttcttatatgtgccg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taacagcagagtgcgctataattacattagtttacttggagagacttcttatatgtgccg 240
Query: 823 atcttgacattgcaccatctaattggaaaagaattgtattaggagcaatattactcgcta 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcttgacattgcaccatctaattggaaaagaattgtattaggagcaatattactcgcta 300
Query: 883 gcaaggtttgggatgatcaagctgtgtggaatgtagattactgccaaatattgaaagaca 942
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 gcaaggtttgggatgatcaagctgtgtggaat-tagattactgccaaatattgaaagaca 359
Query: 943 tcactgtagaggatatgaatgagttagagagacagtttttagaaatgttacagtttaata 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tcactgtagaggatatgaatgagttagagagacagtttttagaaatgttacagtttaata 419
Query: 1003 ttaatgttccatcaagtgtgtacgcaaaatattattttgatttacgtacactggcagagg 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttaatgttccatcaagtgtgtacgcaaaatattattttgatttacgtacactggcagagg 479
Query: 1063 caaatgatttagctttccccagtgagcccttgagtaaagaaagggcacagaaattggaag 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caaatgatttagctttccccagtgagcccttgagtaaagaaagggcacagaaattggaag 539
Query: 1123 caatgtcaagagttatggaggataaaatatcagcagaagttaagaatggcatcaaaaagt 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 caatgtcaagagttatggaggataaaatatcagcagaagttaagaatggcatcaaaaagt 599
Query: 1183 ggtcaagcttagataatgtcaattcaggtgctggagtcagacgtagtgtggccattttat 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ggtcaagcttagataatgtcaattcaggtgctggagtcagacgtagtgtggccattttat 659
Query: 1243 cttaatttcaaaattgatcaaacaattccagataataatgaaagcaagtttgcacctaat 1302
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 660 cttaatttaaaaattgatcaaacaattccagataataatgnnngcaagtttgcacctaat 719
Query: 1303 tgtgaaatatattttaattttggtgcggtattaatggataataatttacaataaatgtga 1362
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tgttaaatatattttaattttggtgcggtattaatggataataatttacaataaatgtga 779
Query: 1363 tgc 1365
|||
Sbjct: 780 tgc 782
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,937
Number of extensions: 5100
Number of successful extensions: 5100
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5099
Number of HSP's successfully gapped: 1
Length of query: 1747
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1730
Effective length of database: 8,119,229
Effective search space: 14046266170
Effective search space used: 14046266170
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)