BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13088 (UTR included)
(6037 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061B2C05 1411 0.0
BF14_1281_C1 864 0.0
BF01020A1G01 361 9e-99
>BF01061B2C05
Length = 793
Score = 1411 bits (712), Expect = 0.0
Identities = 733/740 (99%)
Strand = Plus / Plus
Query: 368 ggctttagtgcggttttcggcgtttttgttttgaacactgaaaatattttaaaacgggtt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctttagtgcggttttcggcgtttttgttttgaacactgaaaatattttaaaacgggtt 60
Query: 428 gatgttctctgtgttgtgtatcatgaattaaaatgtattatttgtacgtgggttttcatt 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgttctctgtgttgtgtatcatgaattaaaatgtattatttgtacgtgggttttcatt 120
Query: 488 gttaaattgcaatatgcctccagtgatatcccgcaataaaaagaatggcgctgagtatga 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttaaattgcaatatgcctccagtgatatcccgcaataaaaagaatggcgctgagtatga 180
Query: 548 gaatgtactaagtactaagtgcaatgtgcttgattttgagaaatacattcaagaaaacaa 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatgtactaagtactaagtgcaatgtgcttgattttgagaaatacattcaagaaaacaa 240
Query: 608 aacacttcttttaaatgatccattgagggaaatacttctctatccatctgatgatgtttc 667
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 aacacttcttttaaatgatccattgagggaaatacttctatatccatctgatgatgtttc 300
Query: 668 tagtgttgtgctacctcgtcgttggagaactgtgacaacagctgtaccagatgtcagaac 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtgttgtgctacctcgtcgttggagaactgtgacaacagctgtaccagatgtcagaac 360
Query: 728 tgcatcaacatgtcctctcctaacgagacaggcattacttagttacgcctctagctggaa 787
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 tgcatcaacatgtcctctcctaacgagacaggcattacttagttatgcctctagctggaa 420
Query: 788 ccttgttcattataaatacagcaactattccggatcttatcttaatttaccaagaccgtt 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccttgttcattataaatacagcaactattccggatcttatcttaatttaccaagaccgtt 480
Query: 848 aaatgataagctgctggaagaagtgtatgatattgatgctgaaacagagaaagatcatga 907
|||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 481 aaatgataagctactggaagaagtatatgatattgatgctgaaacagagaaggatcatga 540
Query: 908 gtcccaagctaaggtggacgttggaaccaaagagggctacctgctcaaaggaccagaaat 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcccaagctaaggtggacgttggaaccaaagagggctacctgctcaaaggaccagaaat 600
Query: 968 cggttctgataggatattcagcaatctcgcttcaaaatcgtttaagaaacgctattgctc 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cggttctgataggatattcagcaatctcgcttcaaaatcgtttaagaaacgctattgctc 660
Query: 1028 aatggtcagagaggcggacggagcttacatactcgaagtgtataaagacgaaaagaaaac 1087
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 661 aatggtgagagaggcggacggagcttacatactcgaagtgtataaagacgagaagaaaac 720
Query: 1088 tgacactaaactgactattg 1107
||||||||||||||||||||
Sbjct: 721 tgacactaaactgactattg 740
>BF14_1281_C1
Length = 1780
Score = 864 bits (436), Expect = 0.0
Identities = 457/464 (98%)
Strand = Plus / Minus
Query: 5386 aggccatgtgttgccaacttcacatagctgctttgatagcggaatatctcaaactgcgag 5445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 aggccatgtgttgccaacttcacatagctgctttgatagcggaatatctcaaactgcgag 1655
Query: 5446 gaactcaaacttggggctccgaggctttcgcggatttgtccttaaacatacctaaagatg 5505
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 1654 gaactcaaacttggggctccgaggctttcgcggacttgtccttgaacatacctaaagatg 1595
Query: 5506 aaatcggccttaagatagacgagggtaagtaaaaccattcattaatctacaggttcttag 5565
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1594 aaatcggccttaagatagacgagggtaagtgaaaccattcattaatctacaggttcttag 1535
Query: 5566 gctttagaccgttaatataacatgttataaaggagttagtatcgttttacaagctcttta 5625
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1534 gctttagaccgttaatataacatattataaaggagttagtattgttttacaagctcttta 1475
Query: 5626 tttctgacttaatattaaattttaatcaagccgtgcgtcatcctatattgtattcagttt 5685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 tttctgacttaatattaaattttaatcaagccgtgcgtcatcctatattgtattcagttt 1415
Query: 5686 ttctcttgtcgactatgcactagtaagctcacagtctttcttatagtcgtgggacacaat 5745
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1414 ttctcttgtcgactatgcactagtaagttcacagtctttcttatagtcgtgggacacaat 1355
Query: 5746 gctttttgttatcttagagaaagtatccaaagggcagaatgcgttacatccgggaacttc 5805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 gctttttgttatcttagagaaagtatccaaagggcagaatgcgttacatccgggaacttc 1295
Query: 5806 cattagtcgaggctcggctgaatcgtcatcccagtagtatatct 5849
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1294 cattagtcgaggctccgctgaatcgtcatcccagtagtatatct 1251
Score = 101 bits (51), Expect = 1e-20
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 5987 cttaaatccaaatcgctgaccgtgcgtcaagtcatttttatccttcttccc 6037
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 cttaaatccaaatcgctgaccgtgcgtcaagtcatttttatccttcttccc 1202
>BF01020A1G01
Length = 445
Score = 361 bits (182), Expect = 9e-99
Identities = 194/198 (97%)
Strand = Plus / Minus
Query: 5386 aggccatgtgttgccaacttcacatagctgctttgatagcggaatatctcaaactgcgag 5445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aggccatgtgttgccaacttcacatagctgctttgatagcggaatatctcaaactgcgag 227
Query: 5446 gaactcaaacttggggctccgaggctttcgcggatttgtccttaaacatacctaaagatg 5505
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 226 gaactcaaacttggggctccgaggctttcgcggacttgtccttgaacatacctaaagatg 167
Query: 5506 aaatcggccttaagatagacgagggtaagtaaaaccattcattaatctacaggttcttag 5565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aaatcggccttaagatagacgagggtaagtaaaaccattcattaatctacaggttcttag 107
Query: 5566 gctttagaccgttaatat 5583
|||||| ||||||||||
Sbjct: 106 gctttaacccgttaatat 89
Score = 149 bits (75), Expect = 6e-35
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 5557 ggttcttaggctttagaccgttaatataacatgttataaaggagttagtatcgttttaca 5616
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 9 ggttcttaggctttaacccgttaatataacatgttataaaggagttagtattgttttaca 68
Query: 5617 agctctttatttctgacttaatattaa 5643
|||||||||||||||||||||||||||
Sbjct: 69 agctctttatttctgacttaatattaa 95
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 84,095
Number of extensions: 9712
Number of successful extensions: 9712
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 9712
Number of HSP's successfully gapped: 5
Length of query: 6037
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6019
Effective length of database: 8,109,745
Effective search space: 48812555155
Effective search space used: 48812555155
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)