BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13091 (UTR included)
(3244 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_244_C1 747 0.0
BF01005A1A08 507 e-143
>BF14_244_C1
Length = 886
Score = 747 bits (377), Expect = 0.0
Identities = 425/437 (97%), Gaps = 3/437 (0%)
Strand = Plus / Plus
Query: 1937 gaatctcttcgcctttggggacgtcgatgatgtcggggttgaagcaaaattgcaacatcc 1996
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 451 gaatctcttcgcctttggggacgtcgatgatgtcggcgttgaagcaaaactgcaacatcc 510
Query: 1997 aatggcagtggcttacaatgaggccaataaaacattatatgtagcagacacgtacaatca 2056
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aatggcagtggcttacaatgaagccaataaaacattatatgtagcagacacgtacaatca 570
Query: 2057 caaaataaagaaagtcgatgtcggaccacagaaagtgtcgacgatcaatccaacgatgat 2116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 caaaataaagaaagtcgatgtcggaccacagaaagtgtcgacgatcaatccaacgatgat 630
Query: 2117 cgaaagcactgatccggctaagttcaacgaaccctcaggcctgtccatcagctcggacgg 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 cgaaagcactgatccggctaagttcaacgaaccctcaggcctgtccatcagctcggacgg 690
Query: 2177 gaaatacctctacatagccgacaccaacaatcacagcataaaaatactgaacgtagccaa 2236
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 691 gaaatacctctacatagccgacacaaacaatcacagcataaaaatactgaacgtagccaa 750
Query: 2237 aaacgtgtgtcaggagttcaaagtgcgtctacccgatccgaaattcacggaacccgaga- 2295
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 751 aaacgtgtgtcaggagttcaaagtgcgtctacccgatccgaaaatcacggaaaccgagan 810
Query: 2296 acctgatcctatataaaaacgatctg-ttcgtgaacagaaagtgcggccacctcatcata 2354
|||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||||||
Sbjct: 811 acctgatcctatataaaaacgatctgtttcgt-cacagaaaatgcggccatctcatcata 869
Query: 2355 tacttcaacgttaattt 2371
|||||||||||||||||
Sbjct: 870 tacttcaacgttaattt 886
Score = 272 bits (137), Expect = 3e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 1692 atttggtggaaatacaagtcgtattcagaaggtacgtgcgtgtgtgtggcggggtcgggg 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttggtggaaatacaagtcgtattcagaaggtacgtgcgtgtgtgtggcggggtcgggg 60
Query: 1752 gcggaggccgcccgcaacagtgcgtacgcagccagcgccgccttcgcacagccatcagct 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcggaggccgcccgcaacagtgcgtacgcagccagcgccgccttcgcacagccatcagct 120
Query: 1812 ctcgcgctacgatccgg 1828
|||||||||||||||||
Sbjct: 121 ctcgcgctacgatccgg 137
Score = 204 bits (103), Expect = 6e-52
Identities = 109/111 (98%)
Strand = Plus / Plus
Query: 1827 ggatcgagcccagaggtattcatagctgactccgagagctcgtccataagaagactcgcg 1886
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 275 ggatccagcccagaggtattcatagctgactccgagagctcatccataagaagactcgcg 334
Query: 1887 ctgtccactggacaagttagtacgttatgtggaggcgacaggaacccattg 1937
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ctgtccactggacaagttagtacgttatgtggaggcgacaggaacccattg 385
>BF01005A1A08
Length = 273
Score = 507 bits (256), Expect = e-143
Identities = 262/264 (99%)
Strand = Plus / Plus
Query: 2074 atgtcggaccacagaaagtgtcgacgatcaatccaacgatgatcgaaagcactgatccgg 2133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atgtcggaccacagaaagtgtcgacgatcaatccaacgatgatcgaaagcactgatccgg 69
Query: 2134 ctaagttcaacgaaccctcaggcctgtccatcagctcggacgggaaatacctctacatag 2193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ctaagttcaacgaaccctcaggcctgtccatcagctcggacgggaaatacctctacatag 129
Query: 2194 ccgacaccaacaatcacagcataaaaatactgaacgtagccaaaaacgtgtgtcaggagt 2253
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ccgacacaaacaatcacagtataaaaatactgaacgtagccaaaaacgtgtgtcaggagt 189
Query: 2254 tcaaagtgcgtctacccgatccgaaattcacggaacccgagaacctgatcctatataaaa 2313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcaaagtgcgtctacccgatccgaaattcacggaacccgagaacctgatcctatataaaa 249
Query: 2314 acgatctgttcgtgaacagaaagt 2337
||||||||||||||||||||||||
Sbjct: 250 acgatctgttcgtgaacagaaagt 273
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 392,216
Number of extensions: 7994
Number of successful extensions: 7994
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7992
Number of HSP's successfully gapped: 4
Length of query: 3244
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3226
Effective length of database: 8,109,745
Effective search space: 26162037370
Effective search space used: 26162037370
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)