BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13104 (UTR included)
(1654 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2A08 1483 0.0
>BF01060B2A08
Length = 816
Score = 1483 bits (748), Expect = 0.0
Identities = 773/783 (98%)
Strand = Plus / Plus
Query: 501 atgccggtaaaactatataaaatgaaattgagtcctccagcctgcgctgctatgatgatt 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atgccggtaaaactatataaaatgaaattgagtcctccagcctgcgctgctatgatgatt 93
Query: 561 tgcgaaattcataatgtccctgttgagatgattgatgttgatcttataaaacgtgagaac 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tgcgaaattcataatgtccctgttgagatgattgatgttgatcttataaaacgtgagaac 153
Query: 621 tacacaccggaatttttaaagaaaaatccgatgcataccgttcctgtgttagaggatgga 680
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tacacaccggaatatttaaagaaaaatccgatgcataccgttcctgtgttagaggatgga 213
Query: 681 aacctcatcttacatgatagtaacgctattcttacatacattaatgaaatgtatggcaaa 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aacctcatcttacatgatagtaacgctattcttacatacattaatgaaatgtatggcaaa 273
Query: 741 gaggactctttgtatccaaaagatttaaagcagagagcattagtagatcagaaattgttt 800
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gatgactctttgtatccaaaagatttaaagcagagagcattagtagatcagaaattgttt 333
Query: 801 tttaacacccttttattcacaagattgcgtaacgttacgtacgcagcaataatcgaagga 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tttaacacccttttattcacaagattgcgtaacgttacgtacgcagcaataatcgaagga 393
Query: 861 gtacgaaagccatctgaaaaaatgctgaaagaaattgaagaagcatatggttttcttgag 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtacgaaagccatctgaaaaaatgctgaaagaaattgaagaagcatatggttttcttgag 453
Query: 921 gcatttctcaacaactcaaaatttgtcgccggtgataggatgactcttgcagatatagcc 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gcatttctcaacaactcaaaatttgtcgccggtgataggatgactcttgcagatatagcc 513
Query: 981 attgttgccactgtatcaggcctgcggcatataattgccattgatccaaaacagtttccc 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 attgttgccactgtatcaggcctgcggcatataattgccattgatccaaaacagtttccc 573
Query: 1041 aaattaaataattggtttatggacatggagaaacaaccattctttcagaaatgcacggtt 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aaattaaataattggtttatggacatggagaaacaaccattctttcagaaatgcacggtt 633
Query: 1101 cctggttcaaagattttgaaagacctcttaaaagaaaagcttgatttgatgtaatatctt 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cctggttcaaagattttgaaagacctcttaaaagaaaagcttgatttgatgtaatatctt 693
Query: 1161 ataaaatgtcaataattgttcacaggacgatgttttaacttttcaattaaagaaaaaatc 1220
||||||| |||||||||||||||| |||||||||||||||| | ||||||||||||
Sbjct: 694 ataaaatatcaataattgttcacatgacgatgttttaacttnnnnantaaagaaaaaatt 753
Query: 1221 ttatttgaggatatttacattaaatccgcaactttcatgtctgactgcatgttataaaaa 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 ttatttgaggatatttacattaaatccgcaactttcatgtctgactgcatgttataaaaa 813
Query: 1281 cta 1283
|||
Sbjct: 814 cta 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,506
Number of extensions: 6108
Number of successful extensions: 6108
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6108
Number of HSP's successfully gapped: 1
Length of query: 1654
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1637
Effective length of database: 8,119,229
Effective search space: 13291177873
Effective search space used: 13291177873
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)