BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13127 (UTR included)
(1921 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B2D03 1239 0.0
>BF01027B2D03
Length = 750
Score = 1239 bits (625), Expect = 0.0
Identities = 634/637 (99%)
Strand = Plus / Plus
Query: 208 aatttatgaataaaataagaactgctggtgatggaatggaatccgtggactttacgaaag 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 aatttatgaataaaataagaactgctggtgatggaatggaatccgtggactttacgaaag 111
Query: 268 aaaatcgtccaatatccgacccaaaatctactactggattaacctgccaagagtctttgc 327
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 112 aaaatcgtccaatatccgacgcaaaatctactactggattaacctgccaagagtctttgc 171
Query: 328 ctggtcgaaggcttgtccaaatatatccaagcaaagttgtaacacccgaaagaagaagct 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ctggtcgaaggcttgtccaaatatatccaagcaaagttgtaacacccgaaagaagaagct 231
Query: 388 cacatatatattccaagactcctaagtttgttccctatgaaccatacccgggggctgtta 447
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 232 cacatatatattccaagactcctaagtttgttccttatgaaccatacccgggcgctgtta 291
Query: 448 aacctatcacgccaaattttaactctaaaggaagcaaaaagtcacgaaatcatatggata 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aacctatcacgccaaattttaactctaaaggaagcaaaaagtcacgaaatcatatggata 351
Query: 508 ttaataaattaattaatcaaatgtctcaaatgaataccaccataaatgaatatagaccaa 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttaataaattaattaatcaaatgtctcaaatgaataccaccataaatgaatatagaccaa 411
Query: 568 ggagtaaactattatcttgcagtgataaatctgaaacagattgtgataaggtaaatgttg 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggagtaaactattatcttgcagtgataaatctgaaacagattgtgataaggtaaatgttg 471
Query: 628 ataatgaaaagcaaaagaaaattgatgaactaaccaaagaaaatgaaagtttgaaggaac 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ataatgaaaagcaaaagaaaattgatgaactaaccaaagaaaatgaaagtttgaaggaac 531
Query: 688 aactcaaacaacaagcgcaggtaaataaggaattaaaaacaatgctggtggcatcaatgg 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aactcaaacaacaagcgcaggtaaataaggaattaaaaacaatgctggtggcatcaatgg 591
Query: 748 gtgaggatttggagtttcaagtacactcacttaatgaggataagaaacacttggcgaacg 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtgaggatttggagtttcaagtacactcacttaatgaggataagaaacacttggcgaacg 651
Query: 808 ctttgctgaactcagctcaacatttgtctacccatca 844
|||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctttgctgaactcagctcaacatttgtctacccatca 688
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 87 tttgcattctttttgctaacaatatggatactttgatatcttttaatgcca 137
||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 1 tttgcattctttttgctaaaaacatggatactttgatatcttttaatgcca 51
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 301,937
Number of extensions: 6370
Number of successful extensions: 6370
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6370
Number of HSP's successfully gapped: 2
Length of query: 1921
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1904
Effective length of database: 8,119,229
Effective search space: 15459012016
Effective search space used: 15459012016
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)