BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13137 (UTR included)
(5026 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1H08 190 1e-47
BF01010B2F09 149 5e-35
BF01056B1D02 141 1e-32
BF01023A2A12 139 5e-32
BF01052B1H02 121 1e-26
BF01029B2F12 119 5e-26
>BF01037B1H08
Length = 758
Score = 190 bits (96), Expect = 1e-47
Identities = 136/148 (91%), Gaps = 1/148 (0%)
Strand = Plus / Plus
Query: 3768 gtcgtggtggcctggaggtttaaggcccgcctctcacacgtgagggtgcgggttcgaaac 3827
||||| |||||||||||||| ||||||||||||||| |||||| || |||||||||||||
Sbjct: 71 gtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaaac 130
Query: 3828 ctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaagagtattcagaca 3887
||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||
Sbjct: 131 ctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagaatatttagtca 190
Query: 3888 ccactgac-gacggtgaaggaaaacatc 3914
|||||||| |||||||| |||||||||
Sbjct: 191 ccactgacggacggtgagtgaaaacatc 218
>BF01010B2F09
Length = 764
Score = 149 bits (75), Expect = 5e-35
Identities = 121/135 (89%), Gaps = 1/135 (0%)
Strand = Plus / Minus
Query: 3774 gtggcctggaggtttaaggcccgcctctcacacgtgagggtgcgggttcgaaacctggcg 3833
|||| ||||||||| |||||| ||||||||||||||| | |||||||||||||||| |
Sbjct: 544 gtgggctggaggttaaaggccagcctctcacacgtgaagtcgcgggttcgaaacctgaca 485
Query: 3834 agtaccaatgtgatcttttccgagtcatatgtactttctaagagtattcagacaccactg 3893
||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||
Sbjct: 484 agtaccaatgtgatcttcatcgagtcatatgtactttctaagagtatttagacgccactg 425
Query: 3894 ac-gacggtgaagga 3907
|| ||||||||||||
Sbjct: 424 acggacggtgaagga 410
>BF01056B1D02
Length = 778
Score = 141 bits (71), Expect = 1e-32
Identities = 129/144 (89%), Gaps = 7/144 (4%)
Strand = Plus / Plus
Query: 3768 gtcgtggtggcctggaggtttaaggcccgcctctcacacgtgagggtgcgggttcgaaac 3827
|||||||||||||||||||| |||| ||||| | |||||||||| ||||||| |||||
Sbjct: 459 gtcgtggtggcctggaggttaaagg-ccgcccat--cacgtgagggcgcgggtt-gaaac 514
Query: 3828 ctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaagagtattcagaca 3887
||||| |||||||||||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct: 515 ctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaagggtagttagaca 574
Query: 3888 ccactgacgacggtgaaggaaaac 3911
||||| ||||||||||||||||
Sbjct: 575 ccact---gacggtgaaggaaaac 595
>BF01023A2A12
Length = 723
Score = 139 bits (70), Expect = 5e-32
Identities = 127/141 (90%), Gaps = 5/141 (3%)
Strand = Plus / Plus
Query: 3768 gtcgtggtggcctggaggtttaaggcccgcctctcacacgtgagggtgcgggttcgaaac 3827
|||||||||||||| ||||| |||| ||||| | |||||||||| ||||||| |||||
Sbjct: 54 gtcgtggtggcctgaaggttaaagg-ccgcccat--cacgtgagggcgcgggtt-gaaac 109
Query: 3828 ctggcgagtaccaatgtgatcttttccgagtcatatgtactttctaagagtattcagaca 3887
||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 110 ctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtatttagaca 169
Query: 3888 ccactgac-gacggtgaagga 3907
|||||||| ||||||||||||
Sbjct: 170 ccactgacggacggtgaagga 190
>BF01052B1H02
Length = 790
Score = 121 bits (61), Expect = 1e-26
Identities = 128/148 (86%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 3770 cgtggtggcctggaggtttaaggcccgcctctcacacgtgagggtgcgggttcgaaacct 3829
||||||||||| |||||| |||||||||||||| || ||||||||| |||||||| |||
Sbjct: 561 cgtggtggcctagaggttaaaggcccgcctctcgtacatgagggtgcaggttcgaatcct 502
Query: 3830 ggcgagtaccaatgtgatc--ttttccgagtcatatgtactttctaagagtattcagaca 3887
|| ||||| ||||||||| |||| ||| | ||||| ||||| |||||||||| |||||
Sbjct: 501 gggaagtactaatgtgatctttttttcgaatgatatgcactttttaagagtatttagaca 442
Query: 3888 ccactgac-gacggtgaaggaaaacatc 3914
| |||||| |||||||||||||||||||
Sbjct: 441 ctactgacggacggtgaaggaaaacatc 414
>BF01029B2F12
Length = 749
Score = 119 bits (60), Expect = 5e-26
Identities = 98/108 (90%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 3808 tgagggtgcgggttcgaaacctggcgagtaccaatgtgatcttttccgagtcatatgtac 3867
|||||| |||||||||||||||||| |||||||||||||| || | ||| |||||||||
Sbjct: 671 tgagggcgcgggttcgaaacctggcaagtaccaatgtgat-ttatgagagacatatgtac 613
Query: 3868 tttctaagagtattcagacaccactgac-gacggtgaaggaaaacatc 3914
|||||||||||||| ||||||||||||| ||||||||||||| |||||
Sbjct: 612 tttctaagagtatttagacaccactgacggacggtgaaggaagacatc 565
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 573,849
Number of extensions: 11047
Number of successful extensions: 11047
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 11041
Number of HSP's successfully gapped: 6
Length of query: 5026
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5008
Effective length of database: 8,109,745
Effective search space: 40613602960
Effective search space used: 40613602960
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)