BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13150 (UTR included)
(3553 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2058_C1 1136 0.0
>BF14_2058_C1
Length = 1062
Score = 1136 bits (573), Expect = 0.0
Identities = 595/601 (99%), Gaps = 1/601 (0%)
Strand = Plus / Plus
Query: 2954 gtacagtaaatctggtgtgacaccgaacactaccggctgtaagccgacgaccgaatcagc 3013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 gtacagtaaatctggtgtgacaccgaacactaccggctgtaagccgacgaccgaatcagc 95
Query: 3014 ggacgcaaagaaacgacgcaataaaaaacctaaagcctgaataataattaaaaataaaac 3073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ggacgcaaagaaacgacgcaataaaaaacctaaagcctgaataataattaaaaataaaac 155
Query: 3074 tgcctcaaaa-aaaaacctaacgtcaaataacttttgaaaatggaacatttttgcaaacg 3132
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tgcctcaaaaaaaaaacctaacgtcaaataacttttgaaaatggaacatttttgcaaacg 215
Query: 3133 cgcgttgctccgtcgtaatagtctgtgaaaacatgccttcatattatataaaacaaacaa 3192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cgcgttgctccgtcgtaatagtctgtgaaaacatgccttcatattatataaaacaaacaa 275
Query: 3193 tatatttaatacagaaaattataatatacatagtgttttagatacggtcgctacagtaag 3252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tatatttaatacagaaaattataatatacatagtgttttagatacggtcgctacagtaag 335
Query: 3253 gggcggtcgggatatggatgacagatgagtgatattatacctcaaaaagattgaactatg 3312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gggcggtcgggatatggatgacagatgagtgatattatacctcaaaaagattgaactatg 395
Query: 3313 tttattatcctcatacaaaaacctactttacatattgatacattaaggttgaattttaat 3372
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 396 tttattatcctcatacaaaaacctactttacacattgatacattaaggttgaattttaat 455
Query: 3373 acaagcgtaattaatataggtctttctttttgagtggtagttatagttacactactttaa 3432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 acaagcgtaattaatataggtctttctttttgagtggtagttatagttacactactttaa 515
Query: 3433 tacaaccgtttttatttcgatgattcttttgtcaaatgcatagaggtatttcgagtgcat 3492
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 516 tacaagcgtttttatttcgatgattcttttgtcaaatgcatagaggtgtttcgagtgcat 575
Query: 3493 ataacgcgttgagttctcatattaatgttttaatatatcgataattatttcggttacaac 3552
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 576 acaacgcgttgagttctcatattaatgtttcaatatatcgataattatttcggttacaac 635
Query: 3553 a 3553
|
Sbjct: 636 a 636
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 435,617
Number of extensions: 20195
Number of successful extensions: 20195
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20193
Number of HSP's successfully gapped: 1
Length of query: 3553
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3535
Effective length of database: 8,109,745
Effective search space: 28667948575
Effective search space used: 28667948575
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)