BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13160 (UTR included)
(5143 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A1B04 434 e-121
BF14_3464_C1 408 e-113
>BF01045A1B04
Length = 767
Score = 434 bits (219), Expect = e-121
Identities = 219/219 (100%)
Strand = Plus / Plus
Query: 4925 aagtacaaaaagaaaatgtaatatttatcccgggctaggagtacggccccagtcctagcc 4984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtacaaaaagaaaatgtaatatttatcccgggctaggagtacggccccagtcctagcc 60
Query: 4985 aatatgtactgagaatggttacagcggcggtgacgtgtcgggtgtgagtgagagagagtg 5044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatatgtactgagaatggttacagcggcggtgacgtgtcgggtgtgagtgagagagagtg 120
Query: 5045 tgtgagtgtgtgtcgtctctgtcgcacgcgtcacgttggagcgagacggaggagtcctta 5104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgagtgtgtgtcgtctctgtcgcacgcgtcacgttggagcgagacggaggagtcctta 180
Query: 5105 ctgagtatgttatcagaccggcacatgttataactataa 5143
|||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgagtatgttatcagaccggcacatgttataactataa 219
>BF14_3464_C1
Length = 812
Score = 408 bits (206), Expect = e-113
Identities = 206/206 (100%)
Strand = Plus / Plus
Query: 1284 caggttgaggagcgtaagcgcgctatatgggaggcgtctgtgtccaggcgtgaggctctc 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caggttgaggagcgtaagcgcgctatatgggaggcgtctgtgtccaggcgtgaggctctc 387
Query: 1344 ctccagcgagagcgtgatcgttctgagcgcttggagcgtgcccgggccgcacgctcgtct 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctccagcgagagcgtgatcgttctgagcgcttggagcgtgcccgggccgcacgctcgtct 447
Query: 1404 ccgcggccggccttcgccttcgggtcctccacacccaggctcctagagcctgtcgactct 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ccgcggccggccttcgccttcgggtcctccacacccaggctcctagagcctgtcgactct 507
Query: 1464 gccggcttcttctgggcagcgcgcag 1489
||||||||||||||||||||||||||
Sbjct: 508 gccggcttcttctgggcagcgcgcag 533
Score = 406 bits (205), Expect = e-112
Identities = 256/279 (91%), Gaps = 21/279 (7%)
Strand = Plus / Plus
Query: 1529 ggcggcatcaacgaacaatgtgatgtttgcatctgcgccgctaacacgtcgtgcgtccgc 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggcggcatcaacgaacaatgtgatgtttgcatctgcgccgctaacacgtcgtgcgtccgc 593
Query: 1589 tcttcagcttgacacatccgatactgacaataaag---------------------acga 1627
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 594 tcttcagcttgacacatccgatactgacaataaaggaataatgttctcaagtttgtacga 653
Query: 1628 gccggtgtcccctcagccgctgtggtcgtccgtggcccgtcgaaggaccgacctggtgcc 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gccggtgtcccctcagccgctgtggtcgtccgtggcccgtcgaaggaccgacctggtgcc 713
Query: 1688 caccctccccgcccgtccagagacccggtccggggaggcgaccccgtcccgtcccggcag 1747
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 714 caccctccccgcccgtccagagacccggtccgggganncgaccccgtcccgtcccggcag 773
Query: 1748 ctcgctgtcgtcggcggccccggtgcttcggcgcgcgtc 1786
|||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ctcgctgtcgtcggcggccccggtgcttcggcgcgcgtc 812
Score = 343 bits (173), Expect = 2e-93
Identities = 176/177 (99%)
Strand = Plus / Plus
Query: 1021 aggccttagatcgtgcgaggttggcccgtgagcggcgagaggccgaacaacggaaacgcc 1080
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 155 aggccttagatcgtgcgaggttggcccgcgagcggcgagaggccgaacaacggaaacgcc 214
Query: 1081 tcgacgagctgagagctcatgctgcggcagcccaggctcagagggagaagagggatgagg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tcgacgagctgagagctcatgctgcggcagcccaggctcagagggagaagagggatgagg 274
Query: 1141 atcggaggcggaggatggccgaggctcgctccaaggacgaggataggaggacccagg 1197
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atcggaggcggaggatggccgaggctcgctccaaggacgaggataggaggacccagg 331
Score = 89.7 bits (45), Expect = 4e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 976 cgcttggagcgctcgctggccgtctggctggaaatagtgaacgaa 1020
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgcttggagcgctcgctggccgtctggctggaaatagtgaacgaa 46
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 478,658
Number of extensions: 9046
Number of successful extensions: 9046
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9046
Number of HSP's successfully gapped: 6
Length of query: 5143
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5125
Effective length of database: 8,109,745
Effective search space: 41562443125
Effective search space used: 41562443125
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)