BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13162 (UTR included)
(1420 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2A12 1227 0.0
BF01016B1A05 743 0.0
>BF01054A2A12
Length = 814
Score = 1227 bits (619), Expect = 0.0
Identities = 659/673 (97%)
Strand = Plus / Plus
Query: 1 tagatcttatatcatttaatttattaatgtgctaagaattgtttacaagtaatttacaaa 60
||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||
Sbjct: 142 tagatcttatatcatttaatttagtaatgtgctaagaattgtttaaaactaatttacaaa 201
Query: 61 gtattataacgtattgttttattcaaggtttgataataattgaataaagaaaaagaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtattataacgtattgttttattcaaggtttgataataattgaataaagaaaaagaataa 261
Query: 121 ggatttcggttaaaagtattggattggatcatataaccggaagttaaatatcaaataata 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 262 ggatttcggttaaaagtattggattggattatataaccggaagttaaatatcaaataata 321
Query: 181 gtttggtctttaaatacaaattatattgctggcttaatattataaaacaaaatacacgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtttggtctttaaatacaaattatattgctggcttaatattataaaacaaaatacacgtt 381
Query: 241 cacggtaaaccaccaacgttagccgtttacttgacttaaccatagataataaacatagac 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 382 cacggtaaaccaccaacgttagccgtttacttgacttaaccatagatattaaacatagac 441
Query: 301 aaatagctcttcgtataagtatactgtaatctgtatagccatactgtttatataataaaa 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaatagcttttcgtataagtatactgtaatctgtatagccatactgtttatataataaaa 501
Query: 361 atactgggtgtattcatatcttcaaaacttaggttatgttttgttattttgttgttatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 502 atactgggtgtattcatatcttcaaaacttaggttatgttttgttattttgtttttatga 561
Query: 421 tcataaacctgttgttaaggcgtatgtttatttgttgaatgctttataatttgtgtcaaa 480
||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 562 tcacaaacctgttgttaacgcgtttgtttatttgttgaatgctttataatttgtgtcaaa 621
Query: 481 gcttaaaaaggtcatgtaaaatgactacatatgaagaattaacagctgataagaaagtaa 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 622 gcttaaaaaggtcatgtaaaatgactacatatgaagaattaacggctgataagaaagtaa 681
Query: 541 gagtcgcgcttcacagagacgtcaacaagatatgtacagacacatgccactacaacggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gagtcgcgcttcacagagacgtcaacaagatatgtacagacacatgccactacaacggtt 741
Query: 601 tctctataaattcaggaccaatggccatagtagcaggacttgtttataagaaattgataa 660
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tctctataaactcannaccaatggccatagtagcaggacttgtttataagaaattgataa 801
Query: 661 catatggattaga 673
|||||||||||||
Sbjct: 802 catatggattaga 814
>BF01016B1A05
Length = 750
Score = 743 bits (375), Expect = 0.0
Identities = 482/522 (92%), Gaps = 23/522 (4%)
Strand = Plus / Plus
Query: 1 tagatcttatatcatttaatttattaatgtgctaagaattgtttacaagtaatttacaaa 60
||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||
Sbjct: 243 tagatcttatatcatttaatttagtaatgtgctaagaattgtttaaaactaatttacaaa 302
Query: 61 gtattataacgtattgttttattcaaggtttgataataattgaataaagaaaaagaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtattataacgtattgttttattcaaggtttgataataattgaataaagaaaaagaataa 362
Query: 121 ggatttcggttaaaagtattggattggatca---------tataaccggaagttaaatat 171
|||||||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 363 ggatttcgcttaaaagtattggattggattaacctataactataaccggaagttaaatat 422
Query: 172 caaataatagtttggtctttaaatacaaattatattgctggcttaatattataaaacaaa 231
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 423 caaataatagtttggtctttaaatacaaattatattgctgtcttaatattataaaacaaa 482
Query: 232 atacacgttcacggtaaaccaccaacgttagccgtttacttgacttaaccatagataata 291
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 483 atacacgttcacggtaaaccaccaacggctaacgtttacttgacttaaccatagacaata 542
Query: 292 aacatagacaaatagctcttcgtataagtatactgtaatctgtatagccatactgtttat 351
||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 --------------gcttttcgtataagtatactgtaatctgtatagccatactgtttat 588
Query: 352 ataataaaaatactgggtgtattcatatcttcaaaacttaggttatgttttgttattttg 411
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ataataaaaatactgagtgtattcatatcttcaaaacttaggttatgttttgttattttg 648
Query: 412 ttgttatgatcataaacctgttgttaaggcgtatgtttatttgttgaatgctttataatt 471
|||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 649 ttgttatgatcacaaacctgttgttaacgcgtttgtttatttgttgaatgctttataatt 708
Query: 472 tgtgtcaaagcttaaaaaggtcatgtaaaatgactacatatg 513
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgtgtcaaagcttaaaaaggtcatgtaaaatgactacatatg 750
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,262
Number of extensions: 4664
Number of successful extensions: 4664
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4663
Number of HSP's successfully gapped: 4
Length of query: 1420
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1403
Effective length of database: 8,119,229
Effective search space: 11391278287
Effective search space used: 11391278287
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)