BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13171 (UTR included)
(2680 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1F10 1241 0.0
BF01017B1E02 258 4e-68
>BF01022B1F10
Length = 735
Score = 1241 bits (626), Expect = 0.0
Identities = 638/642 (99%)
Strand = Plus / Plus
Query: 529 gcgacgaggactcagatatgaatttcactacattctcggctgtgggtgcaacgggaacac 588
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gcgacgaggactcggatatgaatttcactacattctcggctgtgggtgcaacgggaacac 153
Query: 589 attttgtcacagcgggtggacagttgccggtcactaaattacaacagaatgtctccaata 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 attttgtcacagcgggtggacagttgccggtcactaaattacaacagaatgtctccaata 213
Query: 649 acggcacacccctgtctcaggtggtgggaatggtgagcggagtgaatatgagtgaaggtg 708
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atggcacacccctgtctcaggtggtgggaatggtgagcggagtgaatatgagtgaaggtg 273
Query: 709 tgcagtatgtacgagcgattgattcatcgtctctccaggcggggcctcaacttatatcag 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgcagtatgtacgagcgattgattcatcgtctctccaggcggggcctcaacttatatcag 333
Query: 769 tgccaattgccttacctggaacaaaacctggtgacccccagcccacagtgcagattcagg 828
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 334 tgccaattgctttacctggaacaaaacccggtgacccccagcccacagtgcagattcagg 393
Query: 829 tcctcagtccaaatctaacgctgcaacagcaacaaccaaaatatcagatgcaaataccaa 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcctcagtccaaatctaacgctgcaacagcaacaaccaaaatatcagatgcaaataccaa 453
Query: 889 ttcaaggatttcaacaaggtggagcggtactcacagtggcgtactcgccggatgggaacg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttcaaggatttcaacaaggtggagcggtactcacagtggcgtactcgccggatgggaacg 513
Query: 949 aatctggtgggatacaactcataggaaacacattaccagaaggtctacaagtgctggcgt 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aatctggtgggatacaactcataggaaacacattaccagaaggtctacaagtgctggcgt 573
Query: 1009 tgcctcaggagatgcaattgatacaacaggaaaataaggaacaagtacagcaaaacatac 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgcctcaggagatgcaattgatacaacaggaaaataaggaacaagtacagcaaaacatac 633
Query: 1069 aacatcaggtgttcataacgcccaacaaccagatcgtgatcaacggccccgacaagtccg 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aacatcaggtgttcataacgcccaacaaccagatcgtgatcaacggccccgacaagtccg 693
Query: 1129 tgaacaacaacaacgacggtgacgtcaccaacatcgtcatca 1170
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tgaacaacaacaacgacggtgacgtcaccaacatcgtcatca 735
Score = 153 bits (77), Expect = 2e-36
Identities = 84/85 (98%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 148 tggaagcttattaatattatacgtggttaaatttatgtttttttccaaaccattttgttt 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 11 tggaagcttattaatattatacgtggttaaatttatgtttttttccaaaccattttg-tt 69
Query: 208 gttaatttgctttttatccgtatag 232
|||||||||||||||||||||||||
Sbjct: 70 gttaatttgctttttatccgtatag 94
>BF01017B1E02
Length = 652
Score = 258 bits (130), Expect = 4e-68
Identities = 136/138 (98%)
Strand = Plus / Plus
Query: 528 tgcgacgaggactcagatatgaatttcactacattctcggctgtgggtgcaacgggaaca 587
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tgcgacgaggactcggatatgaatttcactacattctcggctgtgggtgcaacgggaaca 574
Query: 588 cattttgtcacagcgggtggacagttgccggtcactaaattacaacagaatgtctccaat 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cattttgtcacagcgggtggacagttgccggtcactaaattacaacagaatgtctccaat 634
Query: 648 aacggcacacccctgtct 665
|| |||||||||||||||
Sbjct: 635 aatggcacacccctgtct 652
Score = 143 bits (72), Expect = 2e-33
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 454 atggaggggatcccgtatcttggtggggatgcgtataacgacgcgtgatggacactcggc 513
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 atggaggggatcccgtatcttggtgtggatgcgtataacgacgcgtgatggacactcggc 60
Query: 514 tgggcctaaagaactg 529
||||||||||||||||
Sbjct: 61 tgggcctaaagaactg 76
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,517
Number of extensions: 4886
Number of successful extensions: 4886
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4885
Number of HSP's successfully gapped: 4
Length of query: 2680
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2663
Effective length of database: 8,119,229
Effective search space: 21621506827
Effective search space used: 21621506827
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)