BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13176 (UTR included)
(1969 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1260_C1 2202 0.0
>BF14_1260_C1
Length = 1177
Score = 2202 bits (1111), Expect = 0.0
Identities = 1160/1176 (98%), Gaps = 4/1176 (0%)
Strand = Plus / Plus
Query: 429 caccggttttgttgtgaacttttgagaataataaataataattcatattgtttaattgtt 488
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2 caccggttttgttgtgaacttttgagaataataaataataactcatattgtttaattgtt 61
Query: 489 ataaacgacacaatgtcagaagtgaatgaatttagtaaatatgacgatgttttgacatca 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ataaacgacacaatgtcagaagtgaatgaatttagtaaatatgacgatgttttgacatca 121
Query: 549 atattagtaaatgagaagtcaatattaggatttttatctgcaatatttaatttcctagca 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atattagtaaatgagaagtcaatattaggatttttatctgcaatatttaatttcctagca 181
Query: 609 agacgaactgatttttattatgttcctgaaggaccttacgagaatatgggctttccacca 668
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 182 agacgaactgatttttattatgttcctgaaggaccttacgagaatatgggttttccacca 241
Query: 669 ggtgtagctgaagaactggtgcttaaggtggtgcgtaaatgtgatccaaaagggtggact 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggtgtagctgaagaactggtgcttaaggtggtgcgtaaatgtgatccaaaagggtggact 301
Query: 729 gacagcactaaatctgcagatattaacaacgaaatcatgtgttcaacggttgcccaggaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gacagcactaaatctgcagatattaacaacgaaatcatgtgttcaacggttgcccaggaa 361
Query: 789 gtagaaattgctgccgaagaggatgactcatcacaggagtctaataagcctgattcagaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtagaaattgctgccgaagaggatgactcatcacaggagtctaataagcctgattcagaa 421
Query: 849 tcacaacttggggaaatgaatcaaggagataacatagtcggatcaaaagatgacagatct 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcacaacttggggaaatgaatcaaggagataacatagtcggatcaaaagatgacagatct 481
Query: 909 gtctttccagaagactatgaaccaccatacattccagtacaaaagagcagtgagtcttat 968
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtcttcccagaagactatgaaccaccatacattccagtacaaaagagcagtgagtcttat 541
Query: 969 aatggagctatacaagaaaaatactcctgggcacagactattgctgatttagatgtaaca 1028
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 542 aatggagctatacaagaaaaatactcctgggcacagactattactgatttagatgtaaca 601
Query: 1029 ctcaaattaccaccagatataaagccaaaaggattaaaagttacaataaatcctggagat 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctcaaattaccaccagatataaagccaaaaggattaaaagttacaataaatcctggagat 661
Query: 1089 gtttccgtttcttacggcaataatgtaatcatcaaagattctctcccatataagattaag 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gtttccgtttcttacggcaataatgtaatcatcaaagattctctcccatataagattaag 721
Query: 1149 actatggagagcttttggagtgtgagtgaagggaagatgttaattcatttagaaaaggta 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 actatggagagcttttggagtgtgagtgaagggaagatgttaattcatttagaaaaggta 781
Query: 1209 caagagagatggtggaacaaatttcttgccggagaagaggagatagacctatctaaaatt 1268
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 782 caagagagatggtggaacaaatttcttgccggagaagaggagatagacctatctaacatt 841
Query: 1269 gattgttcaagacctttggatgatctgccagaagatcatgttgccaaggtaagagaactg 1328
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 842 gattgttcaagacctttggatgatctgccagaagatcatgtcgccaaggtaagagaactg 901
Query: 1329 caatggaatcaggagcaaaagatgaaaggccttccgactagtgatgaaataagaaatatt 1388
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 902 caatggaatcaggagcaaaagatgaaaggcctcccgactagtgatgaaataagaaatatt 961
Query: 1389 gaaatcctcaaaaaggcctggaatgcagagggatctcccttcaaaggaacagaatttaac 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gaaatcctcaaaaaggcctggaatgcagagggatctcccttcaaaggaacagaatttaac 1021
Query: 1449 cctaatgtactcaaaaaataaaccatataagctgatataataatactgatagcatttatt 1508
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1022 cctaatgtactcaaaaaataaactatattagctgatataataatactgatagcatttatt 1081
Query: 1509 tgctacgatataattattatatttacttccta----aaaaaatatctttccaagcttcta 1564
|||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||
Sbjct: 1082 tgctacgatataattattatatttacttcctaaaataaaaaatatcttttcaagctccta 1141
Query: 1565 catccccttttaagctgtagctaaagcattttctag 1600
|||||| |||||||||||||||||||||||||||||
Sbjct: 1142 catccctttttaagctgtagctaaagcattttctag 1177
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 279,897
Number of extensions: 6087
Number of successful extensions: 6087
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6086
Number of HSP's successfully gapped: 1
Length of query: 1969
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1952
Effective length of database: 8,119,229
Effective search space: 15848735008
Effective search space used: 15848735008
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)