BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13178 (UTR included)
(1759 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2738_C1 884 0.0
BF14_1260_C1 230 6e-60
>BF14_2738_C1
Length = 749
Score = 884 bits (446), Expect = 0.0
Identities = 488/502 (97%)
Strand = Plus / Plus
Query: 223 agtatttcgattagcagttcgttacctacattcttctttgaagtggaattatataatcgt 282
|||||| ||||||||||| |||||| || |||||| ||||||||||||||||||||||||
Sbjct: 1 agtattccgattagcagtgcgttacatatattcttttttgaagtggaattatataatcgt 60
Query: 283 aaataagatatagaatacttgttatatagatatttttcatttattgcatatacagaattt 342
|||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaataagatataaaatacttcttttatagatatttttcatttattgcatatacagaattt 120
Query: 343 gataattttatctgtaaaagataataaagttaaaatattatttcattaactgttcgatac 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gataattttatctgtaaaagataataaagttaaaatattatttcattaactgttcgatac 180
Query: 403 gaatgctcgtaagttcttttataatatacagtgttcttatcttaataacttcggaatatc 462
||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 181 gaatgctcgtaagttcttttatagtatacagtgttcttatcttaattacttcggaatatt 240
Query: 463 taccgtctattactatggctaagaatttaccgaaaactatgaaagccgtaggcttatata 522
||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 caccatctattactatggctaaaaatttaccgaaaactatgaaagccgtaggcttatata 300
Query: 523 aatatctgcctctgactgacccaaactgtttgttggatttagaattaaatcttcccatga 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatatctgcctctgactgacccaaactgtttgttggatttagaattaaatcttcccatga 360
Query: 583 ttaaaaaagacgaggttttggtggaagtgaaagcaatctcggtgaatcctattgacacaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaaaaaagacgaggttttggtggaagtgaaagcaatctcggtgaatcctattgacacaa 420
Query: 643 aactacgatccccgaaacccattattgaaactagccctcgaatattaggttgggatggtt 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aactacgatccccgaaacccattattgaaactagccctcgaatattaggttgggatggtt 480
Query: 703 caggcactgttgttggaagagg 724
||||||||||||||||||||||
Sbjct: 481 caggcactgttgttggaagagg 502
>BF14_1260_C1
Length = 1177
Score = 230 bits (116), Expect = 6e-60
Identities = 144/153 (94%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 1611 ctagaaaatgctttagctacagcttaaaaggggatgtagaagcttggaaagatatttttt 1670
||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||
Sbjct: 1177 ctagaaaatgctttagctacagcttaaaaagggatgtaggagcttgaaaagatatttttt 1118
Query: 1671 ----taggaagtaaatataataattatatcgtagcaaataaatgctatcagtattattat 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 attttaggaagtaaatataataattatatcgtagcaaataaatgctatcagtattattat 1058
Query: 1727 atcagcttatatggtttattttttgagtacatt 1759
||||||| |||| ||||||||||||||||||||
Sbjct: 1057 atcagctaatatagtttattttttgagtacatt 1025
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,296
Number of extensions: 4821
Number of successful extensions: 4821
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4820
Number of HSP's successfully gapped: 2
Length of query: 1759
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1742
Effective length of database: 8,119,229
Effective search space: 14143696918
Effective search space used: 14143696918
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)