BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13182 (UTR included)
(3049 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1H07 1320 0.0
BF01038B1A12 214 6e-55
>BF01044B1H07
Length = 720
Score = 1320 bits (666), Expect = 0.0
Identities = 681/686 (99%)
Strand = Plus / Plus
Query: 771 agtttaatggtaccagaatctgttagttataacctccttgatgcaatcagtgaaccgaaa 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 agtttaatggtaccagaatctgttagttataacctccttgatgcaatcagtgaaccgaaa 94
Query: 831 ccctcaacctcgaaagctccacagaaacataaaaagaagagagtgccaagggaggatcaa 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ccctcaacctcgaaagctccacagaaacataaaaagaagagagtgccaagggaggatcaa 154
Query: 891 cttctcataacattttcaagcaattcctgttcatcggagagtgttccaataacaaaatct 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cttctcataacattttcaagcaattcctgttcatcggagagtgttccaataacaaaatct 214
Query: 951 gaaaagaatatcgaatctgatattgaagaaaatcttaaaaagatctccttagatgattct 1010
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 215 gaaaagaatatcgaatctgatattgaagaaaatattaaaaagatctccttagatgattct 274
Query: 1011 tgcagtgaatgcaacctgccagcccagagcatcttgcaggtggacaacatttacccagct 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgcagtgaatgcaacctgccagcccagagcatcttgcaggtggacaacatttacccagct 334
Query: 1071 gttatagtccatgtagacggcatatcattctgggttataacagacaacctgacggaggtc 1130
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 335 gttatagtccatgtagacggcatatcattctgggttataacagataacctgacggaggtt 394
Query: 1131 tgtgatttgatgacagaaatgacaagttactataaagagaatccggtgcagctaaatctc 1190
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 395 tgtgatttgatgacagaaatgacaagttactataaagagcatccggtgcagctaaatctc 454
Query: 1191 gaccaagtaagggagttaacctactgcgcatattatgacaacgaagacaatgagtgcttc 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gaccaagtaagggagttaacctactgcgcatattatgacaacgaagacaatgagtgcttc 514
Query: 1251 tatagaggactgttcattagactgagtgaggacgacatgagtatggcggaggtgttcctg 1310
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 515 tatagaggactgttcattagactgagtgaggacgacacgagtatggcggaggtgttcctg 574
Query: 1311 gtggacacaggtgagactcgccgggttcagtcttcatcgcttcagcctctgctgccgcag 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtggacacaggtgagactcgccgggttcagtcttcatcgcttcagcctctgctgccgcag 634
Query: 1371 tttgctagcacaccaccacatgcacggtgctgccatctagcggggccagtttcagatgca 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tttgctagcacaccaccacatgcacggtgctgccatctagcggggccagtttcagatgca 694
Query: 1431 ctcgatagctatgaagatctgataga 1456
||||||||||||||||||||||||||
Sbjct: 695 ctcgatagctatgaagatctgataga 720
>BF01038B1A12
Length = 810
Score = 214 bits (108), Expect = 6e-55
Identities = 185/210 (88%), Gaps = 4/210 (1%)
Strand = Plus / Minus
Query: 2841 taaaagcaattggaatctacaatttttttggtaaatctttacaaaataaaattagtaact 2900
||||||||| ||||||||| || || || | ||||||||| |||| |||| |||||||||
Sbjct: 810 taaaagcaaatggaatctataaattattag-taaatctttccaaattaaa-ttagtaact 753
Query: 2901 ttaaatacacaacagattatgtaatcagtgtatatcaaatcaaagtctggagatgtctta 2960
||||||| || |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 752 ttaaatannnaatagattatgtaatcagtgtatatcaaatcaaagtctggagatgnnnta 693
Query: 2961 gttatatagtagttcaagtgtgctaaaaacagttttatttccaccatacaagtgtctctc 3020
||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 692 gttatatagaagttcaagtgtgttaaaaacagttttatttcnnncatacaagtgtctctc 633
Query: 3021 aaaacgtg--ttttttgtctatcatacata 3048
|||| ||| |||||||||||||| |||||
Sbjct: 632 aaaatgtgttttttttgtctatcaaacata 603
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 365,588
Number of extensions: 15010
Number of successful extensions: 15010
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 15009
Number of HSP's successfully gapped: 2
Length of query: 3049
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3031
Effective length of database: 8,109,745
Effective search space: 24580637095
Effective search space used: 24580637095
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)