BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13186 (UTR included)
(5077 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2E06 1437 0.0
BF01046A2G01 749 0.0
>BF01032A2E06
Length = 750
Score = 1437 bits (725), Expect = 0.0
Identities = 746/752 (99%), Gaps = 2/752 (0%)
Strand = Plus / Plus
Query: 3428 aatgacttgcaaaaaggacgctactgaatctgtatgtatggccgatttattgggagcgtt 3487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatgacttgcaaaaaggacgctactgaatctgtatgtatggccgatttattgggagcgtt 60
Query: 3488 gttcacgtccctggatcatttggaatctgaaagggcggatgacggtttggacgctgtcgg 3547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttcacgtccctggatcatttggaatctgaaagggcggatgacggtttggacgctgtcgg 120
Query: 3548 gaagaagacttacacactgttagtacaaatatgcacgatgctcatggatatccccgtaaa 3607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagaagacttacacactgttagtacaaatatgcacgatgctcatggatatccccgtaaa 180
Query: 3608 ggctgcgtttgacttgagcgaggtgttgtccaagctggagagtctgtgccgctgcagccc 3667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggctgcgtttgacttgagcgaggtgttgtccaagctggagagtctgtgccgctgcagccc 240
Query: 3668 tgtccccgacgtaatctccttgtctgcggggtgtctgacggccgcggcccgggacgcctt 3727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtccccgacgtaatctccttgtctgcggggtgtctgacggccgcggcccgggacgcctt 300
Query: 3728 ggactcgccgcttcttgacgacatactgaagatactggctgccaggctagattacatatg 3787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 ggactcgccgcttcttgacgacatactgaagatactggctgccaggctagattacat--g 358
Query: 3788 tggtgaggtggaatcgtctcaagttgataacgaaaatgatttcccggccatagacgacaa 3847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tggtgaggtggaatcgtctcaagttgataacgaaaatgatttcccggccatagacgacaa 418
Query: 3848 gacgggtcacacagcgctggcgatggtctgcgcacatcttacttggagacttaaatgtgt 3907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gacgggtcacacagcgctggcgatggtctgcgcacatcttacttggagacttaaatgtgt 478
Query: 3908 acaacatttactactgcgagccaaagacctcagcagcgctgtgctgtacacgccttacac 3967
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 479 acaacatttactactgcgagccaaagacctcagcagcgctgtgctgtacacgcctcacac 538
Query: 3968 acaacacactaagatacggagagagttgactgagctgtatgaggctatgcaagtccagtt 4027
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 539 acaacacactaagatacggagagagttgaccgagctgtatgaggctatgcaagtccagtt 598
Query: 4028 gtgtcagctgacaacgtggacagcgagcgtcgcatccctgcgctgtgttataggggccgg 4087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gtgtcagctgacaacgtggacagcgagcgtcgcatccctgcgctgtgttataggggccgg 658
Query: 4088 aagcgacaaggtgctgaacttgtgtgtcaaactgtactcactgctggcgacctacgttaa 4147
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 659 aagcgacaaggtgctgaacttgtgtgtgaaactgtacacactgctggcgacctacgttaa 718
Query: 4148 actgatggacttacccaccgcgaggacattac 4179
||||||||||||||||||||||||||||||||
Sbjct: 719 actgatggacttacccaccgcgaggacattac 750
>BF01046A2G01
Length = 792
Score = 749 bits (378), Expect = 0.0
Identities = 378/378 (100%)
Strand = Plus / Minus
Query: 236 ttgattggagtgctccttttaatgggtgtcttccgaccggacacatggctgtgttcctca 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttgattggagtgctccttttaatgggtgtcttccgaccggacacatggctgtgttcctca 451
Query: 296 ccctctgtgcaattttctcgatcgcagctggatcgcagaaacggtgttttggatctggat 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccctctgtgcaattttctcgatcgcagctggatcgcagaaacggtgttttggatctggat 391
Query: 356 cttgatcttaattcactgattgtagggttttccatatcgaattgttaacaatctctgttg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cttgatcttaattcactgattgtagggttttccatatcgaattgttaacaatctctgttg 331
Query: 416 ttctaatggttcatgcttaataacacccaggaagcttacaaccttggcttctttcataaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttctaatggttcatgcttaataacacccaggaagcttacaaccttggcttctttcataaa 271
Query: 476 acaaatattagtcaaggactagaacatgcttaatattgcacaagcgatctatttctgtgg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 acaaatattagtcaaggactagaacatgcttaatattgcacaagcgatctatttctgtgg 211
Query: 536 ctttgagcaatgccgccaaaatctgtcgttacgtatcgccttacttatgtaccctatatt 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctttgagcaatgccgccaaaatctgtcgttacgtatcgccttacttatgtaccctatatt 151
Query: 596 tttatccaagcatgcaat 613
||||||||||||||||||
Sbjct: 150 tttatccaagcatgcaat 133
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 518,768
Number of extensions: 9321
Number of successful extensions: 9321
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9320
Number of HSP's successfully gapped: 2
Length of query: 5077
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5059
Effective length of database: 8,109,745
Effective search space: 41027199955
Effective search space used: 41027199955
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)