BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13187 (UTR included)
(2503 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2C04 1443 0.0
>BF01024A2C04
Length = 751
Score = 1443 bits (728), Expect = 0.0
Identities = 747/752 (99%), Gaps = 1/752 (0%)
Strand = Plus / Plus
Query: 744 atcaacgctttgggccaaccagccgattttttgttgaacaccaaagatagttcattagtg 803
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaacgctttgggcca-ccagccgattttttgttgaacaccaaagatagttcattagtg 59
Query: 804 tcgtctatccttgcaattggggcagcgatcagcgctttacccgtcggtttttctgccgag 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tcgtctatccttgcaattggggcagcgatcagcgctttacccgtcggtttttctgccgag 119
Query: 864 cgcttcggaagacgacccacgattctgatgctgtctctgccgtttctgatcaactggttg 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cgcttcggaagacgacccacgattctgatgctgtctctgccgtttctgatcaactggttg 179
Query: 924 ctcacaatattcgctaatggatcggggatgcttattgctgctagattttttgctggtttg 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctcacaatattcgctaatggatcggggatgcttattgctgctagattttttgctggtttg 239
Query: 984 ggaacaggtggtatatgcgtgtgcgcgccaatgtacataggggaggtagcggagacgtct 1043
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 240 ggaacaggtggtatctgcgtgtgcgcgcccatgtacataggggaggtagcggagacgtct 299
Query: 1044 atccgcggctcgcttggctcttttttccagctcttcctgactgtaggaatcctcttcacc 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atccgcggctcgcttggctcttttttccagctcttcctgactgtaggaatcctcttcacc 359
Query: 1104 ttcgtggtcggcggttggacccattggaggacgctctccattatatctgctgtgtttccc 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttcgtggtcggcggttggacccattggaggacgctctccattatatctgctgtgtttccc 419
Query: 1164 gtcttactgatcgccgttttctggtggatgccggagacgccgcagtaccttctaggtaaa 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtcttactgatcgccgttttctggtggatgccggagacgccgcagtaccttctaggtaaa 479
Query: 1224 aaccgtcgtcgcgacgccgagaggtctctccgctggctcagaggacccctggccgacctc 1283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aaccgtcgtcgcgacgccgagaggtctctccgctggctcagaggacccctggccgacctc 539
Query: 1284 agcggagaactggaagagatgcagaaagatgtcgacacagcctcccgtcaaagcgccggc 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agcggagaactggaagagatgcagaaagatgtcgacacagcctcccgtcaaagcgccggc 599
Query: 1344 atcctctccatggtgacgcagcgagctcctctgatggcgctgatctgttcattgggcctc 1403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 600 atcctctccatggtgacgcagcgagctcctctgatggcgctgatctgttcattgggactc 659
Query: 1404 atgttcttccagcagttcagcggaatcaacgccgtcatcttctacaccaacaacatcttc 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atgttcttccagcagttcagcggaatcaacgccgtcatcttctacaccaacaacatcttc 719
Query: 1464 cagtccgccggctccaacatcccgccggtcat 1495
|| |||||||||||||||||||||||||||||
Sbjct: 720 caatccgccggctccaacatcccgccggtcat 751
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 355,957
Number of extensions: 21891
Number of successful extensions: 21891
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21890
Number of HSP's successfully gapped: 1
Length of query: 2503
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2486
Effective length of database: 8,119,229
Effective search space: 20184403294
Effective search space used: 20184403294
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)