BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13211 (UTR included)
(3568 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B1C08 1542 0.0
BF01034A1C03 1072 0.0
BF01054B1B05 670 0.0
>BF01057B1C08
Length = 825
Score = 1542 bits (778), Expect = 0.0
Identities = 806/814 (99%), Gaps = 1/814 (0%)
Strand = Plus / Plus
Query: 1377 gtgagtgatatagtagtgagtgcgctcagaaacacacaactctcatttaatctcgcccat 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gtgagtgatatagtagtgagtgcgctcagaaacacacaactctcatttaatctcgcccat 72
Query: 1437 tacccgacctgtccgaggctgaggcggtacgcagctgaacccagcagacttccgctccac 1496
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tacccgacctgtccgagactgaggcggtacgcagctgaacccagcagacttccgctccac 132
Query: 1497 tatgactccatgctacattctgagcgaccgtacacatcgacgcccaactccaccgctggc 1556
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 133 tatgactccatgctacattctgagcgaccgtacacatcgacgtccaactccaccgctggc 192
Query: 1557 tgtctccagctcctcggggacaaacgtctgctggtgaaagtcgtttgcgccaaggatctg 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgtctccagctcctcggggacaaacgtctgctggtgaaagtcgtttgcgccaaggatctg 252
Query: 1617 ggaggaaaatctggttgtatggcgccctactgtgtggtcgaaatggacgaacctcctcag 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggaggaaaatctggttgtatggcgccctactgtgtggtcgaaatggacgaacctcctcag 312
Query: 1677 aggaaccagacagccttcaagagagataccaccagccctgtctgggaggaacacttcctc 1736
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 313 aggaaccagacagccttcaagagagat-ccaccagccctgtctgggaggaacacttcctc 371
Query: 1737 ttcgacctctcggctcaaacagcggagttactgttcgaggtctacgatcgaggacctgtc 1796
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttcgacctctcggctcaaacggcggagttactgttcgaggtctacgatcgaggacctgtc 431
Query: 1797 tcacctggagccgtgaccggcagcacgcaacacagattcctgggtctgggtctggtcggt 1856
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tcacctggagccgcgaccggcagcacgcaacacagattcctgggtctgggtctggtcggt 491
Query: 1857 atagacgagttgctggcggctccctcccagagacagcagataggactccagacgaggccc 1916
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atagacgagctgctggcggctccctcccagagacagcagataggactccagacgaggccc 551
Query: 1917 atggaggagcacgacgtgagcggcagtctcacggtggagttcctgttcattgagggcgct 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atggaggagcacgacgtgagcggcagtctcacggtggagttcctgttcattgagggcgct 611
Query: 1977 gacatccctgacctgggctcaaagccgttcaagatcaaggagagcctgaggacggtgacg 2036
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gacatccctgacctgggctccaagccgttcaagatcaaggagagcctgaggacggtgacg 671
Query: 2037 tcacagggccgcaccaccaccaccaccaagaccaccttccaacagaacggtcacgacacc 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tcacagggccgcaccaccaccaccaccaagaccaccttccaacagaacggtcacgacacc 731
Query: 2097 gggccccagctgacgcagtcggcgttgcaggagctggagatgagtccaacttcacccgcc 2156
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 732 gggccccagctgacgcagtcggccttgcaggagctggagatgagtccaacttcacccgcc 791
Query: 2157 agcaaatccacgctcatcatacactccgtgcagc 2190
||||||||||||||||||||||||||||||||||
Sbjct: 792 agcaaatccacgctcatcatacactccgtgcagc 825
>BF01034A1C03
Length = 780
Score = 1072 bits (541), Expect = 0.0
Identities = 547/549 (99%)
Strand = Plus / Plus
Query: 3020 ggcttacatctcatctccgtacaccgacagaaacataaggatgttgtgatcagcttctgc 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ggcttacatctcatctccgtacaccgacagaaacataaggatgttgtgatcagcttctgc 272
Query: 3080 acaaatatttgttaaggacaatggaagtacaacgtactatattattgtgaaggctttttt 3139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 acaaatatttgttaaggacaatggaagtacaacgtactatattattgtgaaggctttttt 332
Query: 3140 acgaatatatcaacgatgacggctatatattaggtgtaaggaggtcgccgagtcccgctt 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 acgaatatatcaacgatgacggctatatattaggtgtaaggaggtcgccgagtcccgctt 392
Query: 3200 cacgtcacccgcgttagtttagattagttcgctaggacccaccagttgttacctttcaac 3259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cacgtcacccgcgttagtttagattagttcgctaggacccaccagttgttacctttcaac 452
Query: 3260 gccaaagtcgaggagatcgctacctcacgagttctgtcatcacaacactaatttgtatgc 3319
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 453 gccaaagtcgaggagatcgctacctcacgagttctgtcatcacaatactaatttgtatgc 512
Query: 3320 gcttggagttcacgcggcgaggcctggagctgctcgtcacacaggtatcgcacaacgcca 3379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcttggagttcacgcggcgaggcctggagctgctcgtcacacaggtatcgcacaacgcca 572
Query: 3380 cgtatcgtgctcaaagccgctcgccgccgtgaccgtgtatgagcgcgcttctctataacg 3439
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cgtctcgtgctcaaagccgctcgccgccgtgaccgtgtatgagcgcgcttctctataacg 632
Query: 3440 atctatttataacttgttgtttgttctgtttcggtacatgacatattgtatattaatgtt 3499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 atctatttataacttgttgtttgttctgtttcggtacatgacatattgtatattaatgtt 692
Query: 3500 ggttatattatttgtaaagtgattattttttatttaatgtttatttatgaatgttgacga 3559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ggttatattatttgtaaagtgattattttttatttaatgtttatttatgaatgttgacga 752
Query: 3560 tgtttttct 3568
|||||||||
Sbjct: 753 tgtttttct 761
Score = 202 bits (102), Expect = 3e-51
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 2918 gcaaggctacgagtgtcgcgactgtctgctacgctgccacaaacactgccacgtccgtgt 2977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaaggctacgagtgtcgcgactgtctgctacgctgccacaaacactgccacgtccgtgt 60
Query: 2978 gccggccgcctgcccgcggtccaccgtccgagacatggagct 3019
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccggccgcctgcccgcggtccaccgtccgagacatggagct 102
>BF01054B1B05
Length = 687
Score = 670 bits (338), Expect = 0.0
Identities = 374/385 (97%), Gaps = 4/385 (1%)
Strand = Plus / Plus
Query: 3020 ggcttacatctcatctccgtacaccgacagaaacataaggatgttgtgatcagcttctgc 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggcttacatctcatctccgtacaccgacagaaacataaggatgttgtgatcagcttctgc 363
Query: 3080 acaaatatttgttaaggacaatggaagtacaacgtactatattattgtgaaggctttttt 3139
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 acaaatattt-ttaaggacaatggaagtacaacgtactatattattgtgaaggctttttt 422
Query: 3140 acgaatatatcaacgatgacggctatatattaggtgtaaggaggtcgccgagtcccgctt 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acgaatatatcaacgatgacggctatatattaggtgtaaggaggtcgccgagtcccgctt 482
Query: 3200 cacgtcacccgcgttagtttagattagttcgctaggacccaccagttgttacctttcaac 3259
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 483 cacgtcacccgcgttagtttagattaattcgctaggacccaccagttgttacctttcaac 542
Query: 3260 gccaaagtcgaggagatcgctacctcacgagttctgtcatcacaacactaatttgtatgc 3319
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 543 gccaaagtcgaggagatcgctacctcacgagttctgtcatcacaatactaatttgtatgc 602
Query: 3320 gcttggagttcacgcggcgaggcctggagctgctcgtcac---acaggtatcgcacaacg 3376
||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||
Sbjct: 603 gcttggagttcacgcggcgnnncctggagctgctcctcaccctacaggtatcgcacaacg 662
Query: 3377 ccacgtatcgtgctcaaagccgctc 3401
|||||| ||||||||||||||||||
Sbjct: 663 ccacgtctcgtgctcaaagccgctc 687
Score = 377 bits (190), Expect = e-104
Identities = 205/210 (97%)
Strand = Plus / Plus
Query: 2810 gggcgtcaaactgcacatatacaatgagcatactttcgtcgctaaacatcttagcggtgg 2869
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gggcgtcaaactgcacatatacaatgagcataccttcgtcgctaaacatcttagcggtgg 60
Query: 2870 gacagtatgtcctgtgtgtaacaaggccgtcgcccggcgtctcggtaagcaaggctacga 2929
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 61 gacagtatgtcctgtgtgtaataaggccgtcgcccggcgtctcggtaagcacggctacta 120
Query: 2930 gtgtcgcgactgtctgctacgctgccacaaacactgccacgtccgtgtgccggccgcctg 2989
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgtcgcgactgtctgttacgctgccacaaacactgccacgtccgtgtgccggccgcctg 180
Query: 2990 cccgcggtccaccgtccgagacatggagct 3019
||||||||||||||||||||||||||||||
Sbjct: 181 cccgcggtccaccgtccgagacatggagct 210
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 287,819
Number of extensions: 4873
Number of successful extensions: 4873
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4868
Number of HSP's successfully gapped: 5
Length of query: 3568
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3550
Effective length of database: 8,109,745
Effective search space: 28789594750
Effective search space used: 28789594750
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)