BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13213 (UTR included)
(3247 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1A05 349 2e-95
>BF01035X1A05
Length = 728
Score = 349 bits (176), Expect = 2e-95
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 3024 cacacatttatgatgcatagttaatttggctctacacacatttgtgattcatagttaact 3083
|||||| || |||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 27 cacacacttgtgattcatagttaactgggctctacacacatttgtgattcatagttaact 86
Query: 3084 gggctctacacacatttgtgattcatagttaactgggctctacacacatttgtgattcat 3143
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 87 gggctctacacacatttgtgattcatagttaactgggctctacacacacttgtgattcat 146
Query: 3144 agttaactgggctctacacacatttgtgattcatagttaactgggctctacacacatttg 3203
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 147 agttaactgggctctacacacacttgtgattcatagttaatttttctctacacacatttg 206
Query: 3204 tgattcatagttaactgggctctacacacatttgtgattcatag 3247
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 207 tgattcatagttaactgggctctacacacacttgtgattcatag 250
Score = 349 bits (176), Expect = 2e-95
Identities = 212/224 (94%)
Strand = Plus / Plus
Query: 3024 cacacatttatgatgcatagttaatttggctctacacacatttgtgattcatagttaact 3083
||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 61 cacacatttgtgattcatagttaactgggctctacacacatttgtgattcatagttaact 120
Query: 3084 gggctctacacacatttgtgattcatagttaactgggctctacacacatttgtgattcat 3143
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 gggctctacacacacttgtgattcatagttaactgggctctacacacacttgtgattcat 180
Query: 3144 agttaactgggctctacacacatttgtgattcatagttaactgggctctacacacatttg 3203
|||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 agttaatttttctctacacacatttgtgattcatagttaactgggctctacacacacttg 240
Query: 3204 tgattcatagttaactgggctctacacacatttgtgattcatag 3247
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 tgattcatagttaactgggctctacacacacttgtgattcatag 284
Score = 343 bits (173), Expect = 1e-93
Identities = 200/209 (95%)
Strand = Plus / Plus
Query: 3039 catagttaatttggctctacacacatttgtgattcatagttaactgggctctacacacat 3098
||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 8 catagttaactgggctctacacacacttgtgattcatagttaactgggctctacacacat 67
Query: 3099 ttgtgattcatagttaactgggctctacacacatttgtgattcatagttaactgggctct 3158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ttgtgattcatagttaactgggctctacacacatttgtgattcatagttaactgggctct 127
Query: 3159 acacacatttgtgattcatagttaactgggctctacacacatttgtgattcatagttaac 3218
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 128 acacacacttgtgattcatagttaactgggctctacacacacttgtgattcatagttaat 187
Query: 3219 tgggctctacacacatttgtgattcatag 3247
| |||||||||||||||||||||||||
Sbjct: 188 ttttctctacacacatttgtgattcatag 216
Score = 329 bits (166), Expect = 2e-89
Identities = 178/182 (97%)
Strand = Plus / Plus
Query: 3066 tgtgattcatagttaactgggctctacacacatttgtgattcatagttaactgggctcta 3125
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tgtggttcatagttaactgggctctacacacacttgtgattcatagttaactgggctcta 60
Query: 3126 cacacatttgtgattcatagttaactgggctctacacacatttgtgattcatagttaact 3185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacacatttgtgattcatagttaactgggctctacacacatttgtgattcatagttaact 120
Query: 3186 gggctctacacacatttgtgattcatagttaactgggctctacacacatttgtgattcat 3245
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 gggctctacacacacttgtgattcatagttaactgggctctacacacacttgtgattcat 180
Query: 3246 ag 3247
||
Sbjct: 181 ag 182
Score = 317 bits (160), Expect = 6e-86
Identities = 208/224 (92%)
Strand = Plus / Plus
Query: 3024 cacacatttatgatgcatagttaatttggctctacacacatttgtgattcatagttaact 3083
||||||||| |||| ||||||||| | ||||||||||||| |||||||||||||||||||
Sbjct: 95 cacacatttgtgattcatagttaactgggctctacacacacttgtgattcatagttaact 154
Query: 3084 gggctctacacacatttgtgattcatagttaactgggctctacacacatttgtgattcat 3143
|||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 155 gggctctacacacacttgtgattcatagttaatttttctctacacacatttgtgattcat 214
Query: 3144 agttaactgggctctacacacatttgtgattcatagttaactgggctctacacacatttg 3203
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 215 agttaactgggctctacacacacttgtgattcatagttaactgggctctacacacacttg 274
Query: 3204 tgattcatagttaactgggctctacacacatttgtgattcatag 3247
|||||||||||||| | |||||||||||||||||||||||||
Sbjct: 275 tgattcatagttaatttttctctacacacatttgtgattcatag 318
Score = 254 bits (128), Expect = 8e-67
Identities = 179/196 (91%)
Strand = Plus / Plus
Query: 3024 cacacatttatgatgcatagttaatttggctctacacacatttgtgattcatagttaact 3083
|||||| || |||| ||||||||| | ||||||||||||| ||||||||||||||||| |
Sbjct: 129 cacacacttgtgattcatagttaactgggctctacacacacttgtgattcatagttaatt 188
Query: 3084 gggctctacacacatttgtgattcatagttaactgggctctacacacatttgtgattcat 3143
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 189 tttctctacacacatttgtgattcatagttaactgggctctacacacacttgtgattcat 248
Query: 3144 agttaactgggctctacacacatttgtgattcatagttaactgggctctacacacatttg 3203
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 249 agttaactgggctctacacacacttgtgattcatagttaatttttctctacacacatttg 308
Query: 3204 tgattcatagttaact 3219
||||||||||| ||||
Sbjct: 309 tgattcatagtcaact 324
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,226
Number of extensions: 6358
Number of successful extensions: 6358
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6350
Number of HSP's successfully gapped: 6
Length of query: 3247
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3229
Effective length of database: 8,109,745
Effective search space: 26186366605
Effective search space used: 26186366605
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)