BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13228 (UTR included)
(3523 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2099_C1 1683 0.0
>BF14_2099_C1
Length = 1511
Score = 1683 bits (849), Expect = 0.0
Identities = 904/923 (97%), Gaps = 7/923 (0%)
Strand = Plus / Plus
Query: 2608 ccggagaaaacaacatgttcatattcggaatgagagtagccgatgttgaggctctacaga 2667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccggagaaaacaacatgttcatattcggaatgagagtagccgatgttgaggctctacaga 60
Query: 2668 gacgaggttacaacgcctacgaatactacgagcgcaaccccgaattgcgtcaatgcgtcg 2727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacgaggttacaacgcctacgaatactacgagcgcaaccccgaattgcgtcaatgcgtcg 120
Query: 2728 agcagatccgcagtggattcttttcaccggacgagccgggaaagttcgctcacgtggccg 2787
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 agcagatccgcagtggattcttttcaccggacgagccgggaaagttcgcccacgtggccg 180
Query: 2788 atgtgcttctgaaccacgaccgtttcctacactttgctgattatgacgcttacatcgcag 2847
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 atgtgcttctgaaccacgaccgtttcctacactttgccgattatgacgcttacatcgcag 240
Query: 2848 cacaggacaaagtcgctcgcgtttaccaggatccagccaagtgggctgagatggtgatag 2907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaggacaaagtcgctcgcgtttaccaggatccagccaagtgggctgagatggtgatag 300
Query: 2908 aaaacatcgcttcctctggaaaattctcatctgatagaacaattgctgagtacgctcgcc 2967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaacatcgcttcctctggaaaattctcatctgatagaacaattgctgagtacgctcgcc 360
Query: 2968 agatctggggagtggagccctcgtgggagaagctgcccgcaccgcatatgacttagacga 3027
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agatatggggagtggagccctcgtgggagaagctgcccgcaccgcatatgacttagacga 420
Query: 3028 gtctagaccagaccagactgactggaccagtctagtccatataaaaccaggatggagatg 3087
||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||
Sbjct: 421 gtctagaccagaccagactgactagaccagtctagtccagatagaaccaggatggagatg 480
Query: 3088 aaacccttggaatatatttaaacttatatatattgttattagaacaagaaagtaatccat 3147
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 481 aaacccttggaatatatttaaacttatatatattggtattagaacaagaaagtaatccat 540
Query: 3148 g-------tatgatatgtatgtctcggcttatcattgattttgtttgtgaatactcacat 3200
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtatgatatatgatatgtatgtctcggcttatcattgattttgtttgtgaatactcacat 600
Query: 3201 ttatcaaactaacaaataaacatagattttatttcattatatatatttaaatttatttgt 3260
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 601 ttatcaaactaacaaataaacatagattaaatttaattatatatatttaaatttatttgt 660
Query: 3261 gtccgattcaaattttgtattaagctcaattaatacaagcatgttgcccgctaaacgtgt 3320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtccgattcaaattttgtattaagctcaattaatacaagcatgttgcccgctaaacgtgt 720
Query: 3321 tgtgatagatttcttgccagattataaccaagaatattacaaatatttataataatttaa 3380
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 tgtgatagatttcttgccagattataaccaagaatactacaaatatttataataatttaa 780
Query: 3381 tattggtgctgaatttttttatccaagtataaaacaagattatttttgaagacattgtta 3440
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 781 tattggtgctgaatttttttatccaagtacaaaacaagattatttttgaagacattgtta 840
Query: 3441 tatatacatatatatttattagagtattctaacgtgtcatgtatctagtagtcttactat 3500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tatatacatatatatttattagagtattctaacgtgtcatgtatctagtagtcttactat 900
Query: 3501 tactaactttcactacattatag 3523
|||||||||||||||||||||||
Sbjct: 901 tactaactttcactacattatag 923
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 373,887
Number of extensions: 7945
Number of successful extensions: 7945
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7945
Number of HSP's successfully gapped: 2
Length of query: 3523
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3505
Effective length of database: 8,109,745
Effective search space: 28424656225
Effective search space used: 28424656225
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)