BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13229 (UTR included)
(10,849 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1C11 1019 0.0
>BF01005B1C11
Length = 591
Score = 1019 bits (514), Expect = 0.0
Identities = 520/522 (99%)
Strand = Plus / Plus
Query: 10026 gttccgcccttgataataccgttcagtttcggagaagtgccatcaagtcctggagatact 10085
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 70 gttccgcccttgataataccgttcagtttcggagaagtgccatcaaatcctggagatact 129
Query: 10086 gtcgtagtgaactgtgttgcaacaaagggagacttaccacttgaaatatcgtggacattc 10145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gtcgtagtgaactgtgttgcaacaaagggagacttaccacttgaaatatcgtggacattc 189
Query: 10146 agcagtgaaactcttgactcaagtttgcatcgagatattactatcactccgttgggtttt 10205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agcagtgaaactcttgactcaagtttgcatcgagatattactatcactccgttgggtttt 249
Query: 10206 cgcgcctctggtctgacaatcaactctgtcagcgctaaccaccagggaaactacacatgt 10265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cgcgcctctggtctgacaatcaactctgtcagcgctaaccaccagggaaactacacatgt 309
Query: 10266 atcgttcaaaatgcggccggtcgtgccgagcacgcggccactctagtcgtaaatggcacg 10325
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 310 atcgttcaaaatgcggccggtcgtgccgagcacgccgccactctagtcgtaaatggcacg 369
Query: 10326 ttcatattctctattacaaaatgataccgttaaagtggaaactaacatcacaaattagca 10385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttcatattctctattacaaaatgataccgttaaagtggaaactaacatcacaaattagca 429
Query: 10386 ccgacctggaaacttcattcactgtcagacacattacttatcctaagatactaaccatgc 10445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccgacctggaaacttcattcactgtcagacacattacttatcctaagatactaaccatgc 489
Query: 10446 ttgattacaactaatctaacgaaaccatatgtggttttttccagtactgccccgcattgt 10505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttgattacaactaatctaacgaaaccatatgtggttttttccagtactgccccgcattgt 549
Query: 10506 tccgttttcatttgaaacccccctttatgcgggccaagcaac 10547
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tccgttttcatttgaaacccccctttatgcgggccaagcaac 591
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 128,554
Number of extensions: 13560
Number of successful extensions: 13560
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13560
Number of HSP's successfully gapped: 1
Length of query: 10849
Length of database: 8,280,457
Length adjustment: 19
Effective length of query: 10830
Effective length of database: 8,100,261
Effective search space: 87725826630
Effective search space used: 87725826630
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)