BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13230 (UTR included)
(1426 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1C11 1122 0.0
>BF01005B1C11
Length = 591
Score = 1122 bits (566), Expect = 0.0
Identities = 572/574 (99%)
Strand = Plus / Plus
Query: 1 ttgaaaataaccattacataactagcttcattataaaatatttgctgtcccagttccgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ttgaaaataaccattacataactagcttcattataaaatatttgctgtcccagttccgcc 77
Query: 61 cttgataataccgttcagtttcggagaagtgccatcaagtcctggagatactgtcgtagt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 78 cttgataataccgttcagtttcggagaagtgccatcaaatcctggagatactgtcgtagt 137
Query: 121 gaactgtgttgcaacaaagggagacttaccacttgaaatatcgtggacattcagcagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gaactgtgttgcaacaaagggagacttaccacttgaaatatcgtggacattcagcagtga 197
Query: 181 aactcttgactcaagtttgcatcgagatattactatcactccgttgggttttcgcgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aactcttgactcaagtttgcatcgagatattactatcactccgttgggttttcgcgcctc 257
Query: 241 tggtctgacaatcaactctgtcagcgctaaccaccagggaaactacacatgtatcgttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tggtctgacaatcaactctgtcagcgctaaccaccagggaaactacacatgtatcgttca 317
Query: 301 aaatgcggccggtcgtgccgagcacgcggccactctagtcgtaaatggcacgttcatatt 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 318 aaatgcggccggtcgtgccgagcacgccgccactctagtcgtaaatggcacgttcatatt 377
Query: 361 ctctattacaaaatgataccgttaaagtggaaactaacatcacaaattagcaccgacctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctctattacaaaatgataccgttaaagtggaaactaacatcacaaattagcaccgacctg 437
Query: 421 gaaacttcattcactgtcagacacattacttatcctaagatactaaccatgcttgattac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaaacttcattcactgtcagacacattacttatcctaagatactaaccatgcttgattac 497
Query: 481 aactaatctaacgaaaccatatgtggttttttccagtactgccccgcattgttccgtttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aactaatctaacgaaaccatatgtggttttttccagtactgccccgcattgttccgtttt 557
Query: 541 catttgaaacccccctttatgcgggccaagcaac 574
||||||||||||||||||||||||||||||||||
Sbjct: 558 catttgaaacccccctttatgcgggccaagcaac 591
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 183,227
Number of extensions: 4670
Number of successful extensions: 4670
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4670
Number of HSP's successfully gapped: 1
Length of query: 1426
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1409
Effective length of database: 8,119,229
Effective search space: 11439993661
Effective search space used: 11439993661
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)