BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13235 (UTR included)
(2499 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 188 3e-47
BF01047B2H03 186 1e-46
BF01043B1E03 127 9e-29
BF01031B2E06 100 2e-20
BF01055B2A04 92 5e-18
BF01017A1F03 74 1e-12
BF01037A2H12 68 7e-11
>BF14_335_C2
Length = 1827
Score = 188 bits (95), Expect = 3e-47
Identities = 276/337 (81%), Gaps = 22/337 (6%)
Strand = Plus / Minus
Query: 837 acatattcatgtattcgcgaatcttaaagcgcgttgtgatgatagagcttacggttcctt 896
||||||| ||||||||||||| |||||||||| | | | ||||||| |||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 897 gggaaaccaacatccccaaagaccataccatcaaggtcaacaaatattacgagctcacaa 956
|| | ||||||||||||||| ||||| |||||||||||||||| ||||| |||||||| |
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
Query: 957 acgaactcactcgaaataggttcgtcgtgga-tttatacgcggtagaagtgggagc---- 1011
| ||||||||||| | | ||| |||| ||||||||||||||
Sbjct: 1157 ------------ggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagt 1110
Query: 1012 --gagaggtataacggctaaatctctctacaacctactaaaagacttaggcctgtccaga 1069
|||||||||||| |||||||||||||||| |||||||||| |||| ||||||||||||
Sbjct: 1109 gagagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccaga 1050
Query: 1070 actcacatcaattcgttcttggaacgtacttcgaaggcagccctagtaggttcttttcaa 1129
||| ||| || ||| ||||| ||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 1049 actaacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaa 990
Query: 1130 atatggttaggtagggagaggagcttggacagtggag 1166
|| ||||||| | ||||||||||||||| ||||||
Sbjct: 989 atttggttag---gagagaggagcttggacggtggag 956
>BF01047B2H03
Length = 758
Score = 186 bits (94), Expect = 1e-46
Identities = 286/346 (82%), Gaps = 3/346 (0%)
Strand = Plus / Minus
Query: 522 aggcagttggaactgctaggcacttgttagtgggatgtaaggtactcctcgatagcggtc 581
|||||||||||| |||| ||| ||| | ||||||||| | ||||||| ||||||||||
Sbjct: 345 aggcagttggaattgctgagcatttgctgatgggatgtaggctactcctggatagcggtc 286
Query: 582 aatactcgcg-tcgtcacgatagggttctggaaatcatacgtgaagcggttagtctttcg 640
|||||| || || || ||||||||| | | |||||| ||||||||||||| ||| |
Sbjct: 285 aatactaccggtctccatgatagggttttaaatttcatacatgaagcggttagtattttg 226
Query: 641 gtagccagagcgcaaaaaggaataaccacaaacgagcgatcagtaggttttgtgagagag 700
|||| || ||| |||||| |||||||||||||| ||||| | | ||||||||||||||
Sbjct: 225 gtagtcattgcggaaaaagaaataaccacaaacgggcgattaattggttttgtgagagaa 166
Query: 701 ggcattaggactataaaaacaaatgtcaagccttactccatccttaaagcggctacggat 760
| ||||||| ||||||| |||| ||||||||||||| ||||||||||||| | |||||
Sbjct: 165 gacattagggctataaagtcaaacatcaagccttactctatccttaaagcggtttcggat 106
Query: 761 tggactataatgatggatacgtgtgaaaaacaatacaaaatccccgaggatatttgtgcg 820
|| |||||||| |||||||||| || ||| |||||||||||||||| ||| ||||| |
Sbjct: 105 tgcactataatcatggatacgtatggggaacgatacaaaatccccgagcata-ttgtgtg 47
Query: 821 tcggcctccagaccggacata-ttcatgtattcgcgaatcttaaag 865
|||| |||||||| |||||| || || ||||||||||| ||||||
Sbjct: 46 tcggtttccagaccagacatattttatatattcgcgaattttaaag 1
>BF01043B1E03
Length = 830
Score = 127 bits (64), Expect = 9e-29
Identities = 138/162 (85%), Gaps = 3/162 (1%)
Strand = Plus / Plus
Query: 1005 tgggagcgagaggtataacggctaaatctctctacaacctactaaaagacttaggcctgt 1064
|||||| | |||||||||| ||| |||||||||||||||||| ||| |||| |||||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 1065 ccagaactcacatcaattcgttcttggaacgtacttcgaaggcagccctagtaggttctt 1124
|||||||| ||||||| || ||||||||||||||| | ||||||| || |||||| |
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcc---taggtttgt 320
Query: 1125 ttcaaatatggttaggtagggagaggagcttggacagtggag 1166
||||||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggacagtggag 362
>BF01031B2E06
Length = 707
Score = 99.6 bits (50), Expect = 2e-20
Identities = 170/212 (80%), Gaps = 11/212 (5%)
Strand = Plus / Plus
Query: 899 gaaaccaacatccccaaagaccataccatcaaggtcaacaaatattacgagctcacaaac 958
|||||||||||||||||||||||| |||||||| |||| || ||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacga---------- 485
Query: 959 gaactcactcgaaataggttcgtcgtggatttatacgcggtagaagtgggagcgagaggt 1018
| |||||| ||||||||||| | |||| ||||||||||||||||||||||| | |
Sbjct: 486 -agctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgtt 544
Query: 1019 ataacggctaaatctctctacaacctactaaaagacttaggcctgtccagaactcacatc 1078
||| |||||||||||| |||||||||||||| ||| |||||||||||| || |||||
Sbjct: 545 gtaaaagctaaatctctccacaacctactaaaaaccttgggcctgtccagatctaacatc 604
Query: 1079 aattcgttcttggaacgtacttcgaaggcagc 1110
|| | | || |||| |||||||||||||||
Sbjct: 605 aaataatctttagaacatacttcgaaggcagc 636
>BF01055B2A04
Length = 830
Score = 91.7 bits (46), Expect = 5e-18
Identities = 185/229 (80%), Gaps = 13/229 (5%)
Strand = Plus / Minus
Query: 878 atagagcttacggttccttgggaaaccaacatccccaaagaccataccatcaaggtcaac 937
|||||||||||| |||| ||| ||||||||||||||||||||| | ||| | |||||||
Sbjct: 541 atagagcttacgattccctggaaaaccaacatccccaaagaccgtgccaccgaggtcaat 482
Query: 938 aaatattacgagctcacaaacgaactcactcgaaataggttcgtcgtggatttatacgcg 997
| | ||| ||||||| |||||||||||| | ||||| |||||||| | ||
Sbjct: 481 a---agtacaagctcactaacgaactcactaggaatagattcgtcgtaaactt------- 432
Query: 998 gtagaagtgggagcgagaggtataacggctaaatctctctacaacctactaaaagactta 1057
||| || ||| ||||| ||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 431 gtacaattggaagcgaaaggtataacagctaaa--tctctacaacctactaaaagacttg 374
Query: 1058 ggcctgtccagaactcacatcaattcgttcttggaacgtacttcgaagg 1106
||||||| | | ||| |||||| | ||||| ||||||||||||||||
Sbjct: 373 ggcctgt-taaagatcaaatcaatccattcttagaacgtacttcgaagg 326
>BF01017A1F03
Length = 782
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 992 tacgcggtagaagtgggagcgagaggtataacggctaaatctctc 1036
||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 57 tacgcggtagaagcgggagcgagagatataacggctaaatctctc 101
>BF01037A2H12
Length = 773
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 987 atttatacgcggtagaagtgggagcgagaggtataacggctaaatctctctacaacctac 1046
|||| |||| |||| |||| |||||||||||||||| || ||||||||| ||||||| |
Sbjct: 672 atttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgacaacctgc 731
Query: 1047 taaaagactt 1056
||||||||||
Sbjct: 732 taaaagactt 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 254,806
Number of extensions: 5030
Number of successful extensions: 5030
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 5024
Number of HSP's successfully gapped: 9
Length of query: 2499
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2482
Effective length of database: 8,119,229
Effective search space: 20151926378
Effective search space used: 20151926378
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)