BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13243 (UTR included)
(3016 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1433_C1 1065 0.0
BF14_1503_C1 965 0.0
>BF14_1433_C1
Length = 1094
Score = 1065 bits (537), Expect = 0.0
Identities = 595/612 (97%), Gaps = 3/612 (0%)
Strand = Plus / Plus
Query: 2408 tcatttagcgtcgaggcctcctgccatcacgagaacagccgcctcgccttccgaccctcc 2467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcatttagcgtcgaggcctcctgccatcacgagaacagccgcctcgccttccgaccctcc 61
Query: 2468 ctcccctagtccgccagaggagcgccctcagagggagagcgtcctgtgagactgacgcgt 2527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctcccctagtccgccagaggagcgccctcagagggagagcgtcctgtgagactgacgcgt 121
Query: 2528 cctttctgatgtgagggcttatacacccctcaacgctccccactccaacatttaaaattt 2587
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 122 cctttctgatgtgagggcttatatacccctcaacgctccccactccaacattttaaattt 181
Query: 2588 agaacgagacccgtcgttcagaatcctcaagtcatattcaaaatatttccaacagtcgtg 2647
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 182 agaacgagacccgtcgttcagaatcctcaagtcatattcaaagtatttccaacagtcgtg 241
Query: 2648 tgaaatatatcattaccgctcaatccgtactcagcatatttagctgaaaatacttatgta 2707
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 242 tgaaatatatcattaccgctcaatccgtactcagcatatttaactgaaaatacttatgta 301
Query: 2708 ccatatgagggactatttttggcaaagatacatagaaactaccaaagttcttatgtacat 2767
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccatttgagggactatttttggcaaagatacatagaaactaccaaagttcttatgtacat 361
Query: 2768 gctcataacctctatatactgaatcacatagttcgttagtgaggatttttctgtatttta 2827
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 362 gctcataacctctatatactgaatcacatagttcgttagtgaggagttttctgtatgtta 421
Query: 2828 attcttgaataatttcacttgatgattttga-taaaatcttgattatttatataactatc 2886
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422 attcgtgaataatttcacttgatgattttgattaaaatcttgattatttatataactatc 481
Query: 2887 ctctacatcatatttaaattttaaaaaaaaaaac--attttttttatttatattcagttt 2944
|||||||| ||||||||| || |||||||||| | |||||||||||||||||||||||
Sbjct: 482 ctctacataatatttaaacttaaaaaaaaaaatctttttttttttatttatattcagttt 541
Query: 2945 gcataatctgttctagatttcttgatgtcatctccgttttgcgattaagtattttggttg 3004
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcataatctgttctaaatttcttgatgtcatctccgttttgcgattaagtattttggttg 601
Query: 3005 acttggaatatc 3016
||||||||||||
Sbjct: 602 acttggaatatc 613
>BF14_1503_C1
Length = 892
Score = 965 bits (487), Expect = 0.0
Identities = 490/491 (99%)
Strand = Plus / Plus
Query: 1447 gtcagcggaaacacagctccgccgacagatttaaaccgtccctagctgctataaaagcca 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcagcggaaacacagctccgccgacagatttaaaccgtccctagctgctataaaagcca 60
Query: 1507 cgtccaaaacttcaatgagcagccaccgcggcgacggtgatgcggagagcaacatgtata 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtccaaaacttcaatgagcagccaccgcggcgacggtgatgcggagagcaacatgtata 120
Query: 1567 catcaaaattatcagtatccgccaaggagccgtcccgcatggttcgtccgctgtcccgta 1626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catcaaaattatcagtatccgccaaggagccgtcccgcatggttcgtccgctgtcccgta 180
Query: 1627 aggacatcttctactccgggtccgtcatcaacctgccgcagtatcagagccagaagtcgc 1686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggacatcttctactccgggtccgtcatcaacctgccgcagtatcagagccagaagtcgc 240
Query: 1687 tccagggctacagaaactcggtgctgagtctaccgcagagcaggcaggctggggatctcg 1746
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccagggctacaggaactcggtgctgagtctaccgcagagcaggcaggctggggatctcg 300
Query: 1747 aacgacaagaacaatacgatttatgcccatgcctgtcgctgcccgaatccttcaaagcgg 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacgacaagaacaatacgatttatgcccatgcctgtcgctgcccgaatccttcaaagcgg 360
Query: 1807 ccttatcctcaatgctcgacgtgagcctgctgcgagaccccgccttcatgttgataggag 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttatcctcaatgctcgacgtgagcctgctgcgagaccccgccttcatgttgataggag 420
Query: 1867 tgtccaacgtgttcggtatggccgggctgtatgtacccttcgtgtacatagtggacgccg 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtccaacgtgttcggtatggccgggctgtatgtacccttcgtgtacatagtggacgccg 480
Query: 1927 ctcagatgact 1937
|||||||||||
Sbjct: 481 ctcagatgact 491
Score = 500 bits (252), Expect = e-141
Identities = 258/260 (99%)
Strand = Plus / Plus
Query: 1935 actatctctgtcggcgttactccattctgcaccacctacgcggcgtacgtagctgttgcg 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 actatctctgtcggcgttactccattctgcaccacctacgcggcgtacgtagctgttgcg 692
Query: 1995 attgcttttggaattgctatttctggctatatatctctgacgtccatcatcctggtcgac 2054
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 atcgcttttggaattgctatttctggctatatatctctgacgtccatcatcctggtcgac 752
Query: 2055 ctgctgggtcttgacaagctgacgaacgccttcggtctcctgatcctgttccgtggagcc 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctgctgggtcttgacaagctgacgaacgccttcggtctcctgatcctgttccgtggagcc 812
Query: 2115 gctgccatcataggctcgcccctggccggcgccgtctacgacgctacgaggaactacgac 2174
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 813 gctgccatcataggctcgcccctggccggtgccgtctacgacgctacgaggaactacgac 872
Query: 2175 gcctccttctacatggccgc 2194
||||||||||||||||||||
Sbjct: 873 gcctccttctacatggccgc 892
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 304,439
Number of extensions: 6904
Number of successful extensions: 6904
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6901
Number of HSP's successfully gapped: 3
Length of query: 3016
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2998
Effective length of database: 8,109,745
Effective search space: 24313015510
Effective search space used: 24313015510
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)