BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13256 (UTR included)
(2263 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2066_C1 1572 0.0
BF01021A1E04 771 0.0
>BF14_2066_C1
Length = 802
Score = 1572 bits (793), Expect = 0.0
Identities = 799/801 (99%)
Strand = Plus / Plus
Query: 493 aggataacatggcggctatcgatactaacggccctgtgaaaattgaacctgcaatgcgta 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggataacatggcggctatcgatactaacggccctgtgaaaattgaacctgcaatgcgta 61
Query: 553 ccctgaagttgtcagggcatgtcggtttcgacagtctgccagatcagctcgttaataaga 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccctgaagttgtcagggcatgtcggtttcgacagtctgccagatcagctcgttaataaga 121
Query: 613 gcgttcagaatggattcgtattcaatatcctgtgcattggtgagactggtctggggaagt 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcgttcagaatggattcgtattcaatatcctgtgcattggtgagactggtctggggaagt 181
Query: 673 cgactctgatggactcactgttcaatactaactttgagtcaactccaagcccccacaacc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgactctgatggactcactgttcaatactaactttgagtcaactccaagcccccacaacc 241
Query: 733 tacctactgtaaagctgaaggctcacacatatgaactgcaggagagcaatgtccgtctta 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tacctactgtaaagctgaaggctcacacatatgaactgcaggagagcaatgtccgtctta 301
Query: 793 agctgaccatctgtgacaccgtgggttatggagatcaagttaataaagaagacagcttca 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agctgaccatctgtgacaccgtgggttatggagatcaagttaataaagaagacagcttca 361
Query: 853 aagcggtggtggattatattgacgctcaatttgaagcctacctccaagaggagctgaaga 912
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagcggtggtggattatatcgacgctcaatttgaagcctacctccaagaggagctgaaga 421
Query: 913 tcaagcgctctctaccgtcctatcatgacagtcgtcttcatgtctgtctttattttattt 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcaagcgctctctaccgtcctatcatgacagtcgtcttcatgtctgtctttattttattt 481
Query: 973 gtcctacaggccacgggctcaagtccatcgacctcgtgtgtatgaagaagttggatacta 1032
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 482 gtcctacaggccacgggctcaagtccatcgacctagtgtgtatgaagaagttggatacta 541
Query: 1033 aagtgaacatcattcctatcatagccaaggctgacaccatatcaaagactgagctgcaga 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aagtgaacatcattcctatcatagccaaggctgacaccatatcaaagactgagctgcaga 601
Query: 1093 aatttaagtcgaagataatccaggagcttcaggccaacggagtcgagatctaccaattcc 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aatttaagtcgaagataatccaggagcttcaggccaacggagtcgagatctaccaattcc 661
Query: 1153 ctgtggacgacgactcggtgtcggacgtgaacggtgccatgaacacacacattcccttcg 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctgtggacgacgactcggtgtcggacgtgaacggtgccatgaacacacacattcccttcg 721
Query: 1213 ccgtggttggcagcacggacttcgtcaagataggaaataagacggtgcgggcccgccagt 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ccgtggttggcagcacggacttcgtcaagataggaaataagacggtgcgggcccgccagt 781
Query: 1273 acccatggggaaccgtgcaag 1293
|||||||||||||||||||||
Sbjct: 782 acccatggggaaccgtgcaag 802
>BF01021A1E04
Length = 739
Score = 771 bits (389), Expect = 0.0
Identities = 408/413 (98%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 1851 tttgccaaattcgtatataatcaaatgtaacatttctcttcactacatatttttatggta 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgccaaattcgtatataatcaaatgtaacatttctcttcactacatatttttatggta 60
Query: 1911 aaaatagcgagtgatgacccgacgaggacagtccgcacattaactttgaagcacgcgtca 1970
||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 61 aaaatagcgagtgat-acccgacgaggacagtcagcacattaactttgacgcacgcgtca 119
Query: 1971 cgggctgtaacgtggcacacctctagtttatgttccgtgacagccggctgaccggcctgc 2030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 cgggctgtaacgtggcacacctctagtttatgttccgtgacagccggctgaccggcctgc 179
Query: 2031 atgccgcggtgtgtgaaggttgcagaccgaggggtttctccgcacgtatccttaataagt 2090
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 180 acgccgcggtgtgtgaaggttgcagaccgaggggtttctccgcacgtatccttattaagt 239
Query: 2091 cggaacattttataccaaaatatattttattccttagaattagtcttcattactgataag 2150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cggaacattttataccaaaatatattttattccttagaattagtcttcattactgataag 299
Query: 2151 atagtggttagtgcttctgtgtaatcgattaatgataaatgtatttttcaatataacgtt 2210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atagtggttagtgcttctgtgtaatcgattaatgataaatgtatttttcaatataacgtt 359
Query: 2211 gaatgcttatcgagatgctttaaggactatagaggtttgaacgaaactaactt 2263
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaatgcttatcgagatgctttaaggactatagaggtttgaacgaaactaactt 412
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,706
Number of extensions: 5275
Number of successful extensions: 5275
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5274
Number of HSP's successfully gapped: 2
Length of query: 2263
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2246
Effective length of database: 8,119,229
Effective search space: 18235788334
Effective search space used: 18235788334
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)