BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13270 (UTR included)
(1843 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3287_C1 1653 0.0
>BF14_3287_C1
Length = 1024
Score = 1653 bits (834), Expect = 0.0
Identities = 877/892 (98%)
Strand = Plus / Plus
Query: 352 aggtaattatggaagcatcaccagccgcctccgacgtggaaaaacttagtaaattaaggg 411
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 133 aggtaattatggaagcatcaccagtcgcctccgacgtggaaaaacttagtaaattaaggg 192
Query: 412 aagctaactggccaccagtgcttttcttcatttatattcacatactatcctttttcggat 471
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aggctaattggccaccagtgcttttcttcatttatattcacatactatcctttttcggat 252
Query: 472 tatggctccttttcgtcgaagcaaagttaatgacgatattgtttttggttttccttgtgt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tatggctccttttcgtcgaagcaaagttaatgacgatattgtttttggttttccttgtgt 312
Query: 532 cagtgggactcctgggaatgactacaggtgctcatagactatgggcgcatcggacatatg 591
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 313 cagtgggaatcctgggaatgactacaggtgctcatagactatgggcgcatcggacttatg 372
Query: 592 aagccaacagtgcgcttagaattgcattgatgctcttccaaactctcgctggaataggac 651
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 373 aagccaacagtgcgcttagaattgcattgatgctcttccaaacgctcgctggaataggac 432
Query: 652 ctatatacgactgggttcagtaccataggctacaccacgcctacttcaagactgagtcgg 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctatatacgactgggttcagtaccataggctacaccacgcctacttcaagactgagtcgg 492
Query: 712 atccttataatcccaaaaacggattcctacatgcccatttcttcacacgtcttcagaaac 771
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 493 atccttataatcccaaaaacggattcctacacgcccatttcttcacacgtcttcagaaac 552
Query: 772 ttagtcctaaaatgacggcattgaaagatgcaattgacatgtccgaccttcaaaatgatg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttagtcctaaaatgacggcattgaaagatgcaattgacatgtccgaccttcaaaatgatg 612
Query: 832 gaatcgtaatgttccaacaaaggttttattgggttttatatggaattatctttctactat 891
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaatcgtaatgttccaacaaagattttattgggttttatatggaattatctttctactat 672
Query: 892 tgccattgaacgctccgatggaatattgggatgagtccattttgtctacatttttcatca 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgccattgaacgctccgatggaatattgggatgagtccattttgtctacatttttcatca 732
Query: 952 tcggcatactcagatacgccttcattctccacggctcctggttgattgaaagcggggtct 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tcggcatactcagatacgccttcattctccacggctcctggttgattgaaagcggggtct 792
Query: 1012 gtgtatggggattacaggaaggagaaaagtacccgccagattccaatacagtgttcatat 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gtgtatggggattacaggaaggagaaaagtacccgccagattccaatacagtgttcatat 852
Query: 1072 taaatagaacattctggccagaataccactacatttatcctcaagattataaatctggtg 1131
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 taaatagaacattttggccagaataccactacatttatcctcaagattataaatctggtg 912
Query: 1132 aatacggaacttatggctccgggtgttcaaccgcttttatacgaatgttcgctgtaatgg 1191
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 913 aatacggaacttatggctccgggtgttcaaccgctttcatacgaatgttcgctgtaatgg 972
Query: 1192 gattagctaaagatcttcgcactttagaatcagccacattgcaaaaagctct 1243
||||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 973 gattagctaaagatcttcggacttttnnatcagtcacattgcaaaaagctct 1024
Score = 240 bits (121), Expect = 7e-63
Identities = 131/133 (98%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 151 gtgatcacacgcgaacgaagtactgtgttacgttattacaaaatattaacaaaatttcgc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgatcacacgcgaacgaagtactgtgttacgttattacaaaatattaacaaaatttcgc 60
Query: 211 aacagactaagtataaaatttttcatgtattttttttttatgccgtttaccataacagct 270
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 61 aacagactaagtataaaatttttcatgta-tttttttttatgccgtttactataacagct 119
Query: 271 atatttatataaa 283
|||||||||||||
Sbjct: 120 atatttatataaa 132
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 264,151
Number of extensions: 5858
Number of successful extensions: 5858
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5857
Number of HSP's successfully gapped: 2
Length of query: 1843
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1826
Effective length of database: 8,119,229
Effective search space: 14825712154
Effective search space used: 14825712154
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)