BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13290 (UTR included)
(3754 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A2D10 1612 0.0
BF01045B2F03 729 0.0
>BF01058A2D10
Length = 832
Score = 1612 bits (813), Expect = 0.0
Identities = 827/832 (99%)
Strand = Plus / Plus
Query: 2011 ttgtggtcgaagaacaagaaaatactcgctcggtcgacataccccagtgtgcggtaactg 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgtggtcgaagaacaagaaaatactcgctcggtcgacataccccagtgtgcggtaactg 60
Query: 2071 agtggagcaagtggtctccttgctcggtgtcgtgtggtaaggggctacgtatgcgaactc 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtggagcaagtggtctccttgctcggtgtcgtgtggtaaggggctacgtatgcgaactc 120
Query: 2131 gcgaatatcgtatgccacagaaggcgcagatgttccaatgcgaccgtcagcttgtgtcca 2190
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 gcgaatatcgtatgccacagaaggcgcagatgttccaatgcgaccgtcagcttgtgtcta 180
Query: 2191 aggaaatgtgtgtcgcggatattcccgaatgtcctgatagtgaagacccgatacctgact 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggaaatgtgtgtcgcggatattcccgaatgtcctgatagtgaagacccgatacctgact 240
Query: 2251 ctaactcggagtctggtaccgaccttccagtttgccgcacgactgaatggggtccttggg 2310
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctaactcggagtctggtaccgacattccagtttgccgcacgactgaatggggtccttggg 300
Query: 2311 gcgagtgctccgcgacatgtggcgttggaattgctacgaggcgacgaacatttattgatc 2370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcgagtgctccgcgacatgtggcgttggaattgctacgaggcgacgaacatttattgatc 360
Query: 2371 acatgggatacaaaaaatgtcccctagtgaacaccgaggaaaaccgcaaatgcatggagc 2430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acatgggatacaaaaaatgtcccctagtgaacaccgaggaaaaccgcaaatgcatggagc 420
Query: 2431 cgccctgccctgagggagaggttcaagaggtttcggacccccaatgtcccactagtccgt 2490
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgccctgtcctgagggcgaggttcaagaggtttcggacccccaatgtcccactagtccgt 480
Query: 2491 gggcatcgtggtctccttgctcagcgtcatgtggacgtggtgtggcattccgtacccgtc 2550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggcatcgtggtctccttgctcagcgtcatgtggacgtggtgtggcattccgtacccgtc 540
Query: 2551 tgttgctggtgccagcagaccgtcaacaagaatgcagctcgcgagttgaactcatgcaac 2610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgttgctggtgccagcagaccgtcaacaagaatgcagctcgcgagttgaactcatgcaac 600
Query: 2611 aacgtccgtgttccgaaagagaggattgtacaatcgacatgattacagctaagcgtatct 2670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacgtccgtgttccgaaagagaggattgtacaatcgacatgattacagctaagcgtatct 660
Query: 2671 gtatggaggttcccgacccgggtccttgtcgtggagtgtactcccgctgggcgttttcga 2730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtatggaggttcccgacccgggtccttgtcgtggagtgtactcccgctgggcgttttcga 720
Query: 2731 ctctcaagggcatgtgcgtgccttttagctacggtggttgtcgtggaaataagaacaact 2790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctctcaagggcatgtgcgtgccttttagctacggtggttgtcgtggaaataagaacaact 780
Query: 2791 ttatttctcaggaagactgcactaatacatgctctgtgctaactggcggggc 2842
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttatttctcaggangactgcactaatacatgctctgtgctaactggcggggc 832
>BF01045B2F03
Length = 748
Score = 729 bits (368), Expect = 0.0
Identities = 371/372 (99%)
Strand = Plus / Plus
Query: 1218 gcaggttcaggatgtgtcctgataagggcaatggtttacgaaaatgacactcggtggttc 1277
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gcaggttcaggatgtgtgctgataagggcaatggtttacgaaaatgacactcggtggttc 436
Query: 1278 gcagctgacgggcaactgacgcatcgcatatgtgaagaatcgcccagtatagattgctgt 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gcagctgacgggcaactgacgcatcgcatatgtgaagaatcgcccagtatagattgctgt 496
Query: 1338 gcttgcgatgacgcaaagtatagtatggtgtttgagggtctgtggtccccgcagactcat 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gcttgcgatgacgcaaagtatagtatggtgtttgagggtctgtggtccccgcagactcat 556
Query: 1398 cctaaggactttcccgtgcaggctctctggctgacacatttctccgacgtcatcggtgcg 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cctaaggactttcccgtgcaggctctctggctgacacatttctccgacgtcatcggtgcg 616
Query: 1458 actcacgtcaagaacttttctttttggggagaaggggaaattgctactgatggcttcagg 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 actcacgtcaagaacttttctttttggggagaaggggaaattgctactgatggcttcagg 676
Query: 1518 tctttagcagagtggggttcaccaggtctattggagcgtgaactgcatcaacatggtcca 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tctttagcagagtggggttcaccaggtctattggagcgtgaactgcatcaacatggtcca 736
Query: 1578 gcatatctgcgt 1589
||||||||||||
Sbjct: 737 gcatatctgcgt 748
Score = 674 bits (340), Expect = 0.0
Identities = 349/352 (99%)
Strand = Plus / Plus
Query: 842 tggagcgtggtgtttgatagtggtctgtgcgaaggcttgtgacttacatccaggggaagg 901
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tggagcgtggtgtttgatagtggtctgtgctaaggcttgtgacttacatccaggggaagg 60
Query: 902 tgctggggagaaatcaccgggggacaatttctatcgagtcatcattaatggagacgtaga 961
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctggggagaaatcaccaggggacaatttctatcgagtcatcattaatggagacgtaga 120
Query: 962 aagatatactccggaacaaagatatgttgtaactttggttggttcgcgaactcacgacgt 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagatatactccggaacaaagatatgttgtaactttggttggttcgcgaactcacgacgt 180
Query: 1022 ggtacaacagtttaccaggttccagctgatactggatccactagatccatcatctccacg 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtacaacagtttaccaggttccagctgatactggatccactagatccatcatctccacg 240
Query: 1082 gactccgcggaaacagggacagttccagctattcgcggacacgctaagcaagttcgacga 1141
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 gactccgcggaaacagggacagttccagctattcgcggacacgcttagcaagttcgacga 300
Query: 1142 ggaatgtactaattccgtcatagaagctgatgatttgcctaaaaccgaagtg 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaatgtactaattccgtcatagaagctgatgatttgcctaaaaccgaagtg 352
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 387,259
Number of extensions: 7381
Number of successful extensions: 7381
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7379
Number of HSP's successfully gapped: 3
Length of query: 3754
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3736
Effective length of database: 8,109,745
Effective search space: 30298007320
Effective search space used: 30298007320
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)