BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13292 (UTR included)
(1495 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1275_C1 1070 0.0
BF01050B1C10 283 4e-76
>BF14_1275_C1
Length = 827
Score = 1070 bits (540), Expect = 0.0
Identities = 546/548 (99%)
Strand = Plus / Plus
Query: 456 ggtggtttactaagttactttagaggcctattgggtgctcgtgaaatgcggattttgatc 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ggtggtttactaagttactttagaggcctattgggtgctcgtgaaatgcggattttgatc 214
Query: 516 ctgggcttggacggcgccgggaaaaccacaatattgtacaaattgcaagtgggggaggta 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ctgggcttggacggcgccgggaaaaccacaatattgtacaaattgcaagtgggggaggta 274
Query: 576 gtgacaaccatacccactattggtttcaatgtggaacaagttacttacaaaaatttaaag 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtgacaaccatacccactattggtttcaatgtggaacaagttacttacaaaaatttaaag 334
Query: 636 tttcaagtatgggatcttggaggacaaaccagcatcagaccatactggcgatgttactat 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttcaagtatgggatcttggaggacaaaccagcatcagaccatactggcgatgttactat 394
Query: 696 ggcaatacagatgctatcatctatgtggttgattcagcagatagagacagaataggaata 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggcaatacagatgctatcatctatgtggttgattcagcagatagagacagaataggaata 454
Query: 756 tccaaagatgagctcgttcatatgttacgggaagaggagttagctaatgcaatcctcgtg 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tccaaagatgagctcgttcatatgttacgggaagaggagttagctaatgcaatcctcgtg 514
Query: 816 gttctagccaacaagcaagatatggcgggatgtctgactgtggcggaagtacatcaggca 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gttctagccaacaagcaagatatggcgggatgtctgactgtggcggaagtacatcaggca 574
Query: 876 ctcgggttagatgcgctccgagacagaacttttcagatatttaagaccagtgcagtgaga 935
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ctcgggttagatgcactccgagacagaacttttcagatatttaagaccagtgcagtgaga 634
Query: 936 ggtgaaggtcttgaccaagctatggattggctgtctaatgcattgcaggctaggaaataa 995
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ggtgaaggtctcgaccaagctatggattggctgtctaatgcattgcaggctaggaaataa 694
Query: 996 tagtatag 1003
||||||||
Sbjct: 695 tagtatag 702
Score = 311 bits (157), Expect = 2e-84
Identities = 157/157 (100%)
Strand = Plus / Plus
Query: 225 tttacaaaaatctaaattattataaataaataaataaggtatttaaaataaaataaagct 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttacaaaaatctaaattattataaataaataaataaggtatttaaaataaaataaagct 60
Query: 285 acagtgaagcaacgtggatgaatagcaaaaatatcatattactttagttatagcaactaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagtgaagcaacgtggatgaatagcaaaaatatcatattactttagttatagcaactaa 120
Query: 345 tgtttcactaggataagtttattgcgaaaaaatgggt 381
|||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtttcactaggataagtttattgcgaaaaaatgggt 157
Score = 216 bits (109), Expect = 8e-56
Identities = 121/127 (95%)
Strand = Plus / Plus
Query: 1173 agaactgctgtatacaaaaataaaattatatcaataaccgtttgtcagaagatagtgtag 1232
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 701 agaactgctgtatacaaaaataaaattatatcaataaccgtttgtcagangatagtgtan 760
Query: 1233 aaggctctggctggacctaagttatttactctccatatgtctgcattatataatatgtaa 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 nnnnctctggctggacctaagttatttactctccatatgtctgcattatataatatgtaa 820
Query: 1293 atgtgat 1299
|||||||
Sbjct: 821 atgtgat 827
>BF01050B1C10
Length = 658
Score = 283 bits (143), Expect = 4e-76
Identities = 146/147 (99%)
Strand = Plus / Plus
Query: 1349 aaaataattttaatggacagcctttcattttatataattaatactcgaacgggatgtaaa 1408
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 aaaataattttaatggacagcctttcgttttatataattaatactcgaacgggatgtaaa 60
Query: 1409 attaatttagcttccttacaagggataaagttttcaaaataaaccacagttatgtatagt 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attaatttagcttccttacaagggataaagttttcaaaataaaccacagttatgtatagt 120
Query: 1469 ctctatcattgaccattttttttgttt 1495
|||||||||||||||||||||||||||
Sbjct: 121 ctctatcattgaccattttttttgttt 147
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,473
Number of extensions: 7427
Number of successful extensions: 7427
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7425
Number of HSP's successfully gapped: 4
Length of query: 1495
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1478
Effective length of database: 8,119,229
Effective search space: 12000220462
Effective search space used: 12000220462
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)