BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13299 (UTR included)
(2446 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B1G06 1576 0.0
>BF01013B1G06
Length = 838
Score = 1576 bits (795), Expect = 0.0
Identities = 818/828 (98%)
Strand = Plus / Plus
Query: 1444 catacttctgtagtccgaagagtaattctacaacacccctcctcgttataaagagaatgt 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 catacttctgtagtccgaagagtaattctacaacacccctcctcgttataaagagaatgt 70
Query: 1504 tttatttaatatcagggttcggactgtcgatcaatggaaagcacacatactgcggagatt 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tttatttaatatcagggttcggactgtcgatcaatggaaagcacacatactgcggagatt 130
Query: 1564 acatatactccgggcacacaatggttttagtgctaagttacctgatcgtggcagaatatt 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acatatactccgggcacacaatggttttagtgctaagttacctgatcgtggcagaatatt 190
Query: 1624 ctccaaaaaaattatggccggtgcattgggctatgtggggttcggctgttctcggcgtat 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ctccaaaaaaattatggccggtgcattgggctatgtggggttcggctgttctcggcgtat 250
Query: 1684 catttgtgttattagcacacggacattacacagtggatgttgtgatagcatactatataa 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 catttgtgttattagcacacggacattacacagtggatgttgtgatagcatactatataa 310
Query: 1744 caactagattattctggacgttccattcactgctcgtcacgccacatcgaagcggcaacg 1803
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 311 caactagattattctggacgttccactcactgctcgtcacgccacatcgaagcggcaacg 370
Query: 1804 gctacaaccattacatgatacagcgagaatggtggtactggctgttcacctacctggagc 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gctacaaccattacatgatacagcgagaatggtggtactggctgttcacctacctggagc 430
Query: 1864 ggaacgtgcgggggccggtgccgcgacgttacgactggccgctgccctggccgcgcacta 1923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ggaacgtgcgggggccggtgccgcgacgttacgactggccgctgccctggccgcgcacta 490
Query: 1924 agctgttcagtagactcagctagtgacgcgcccgcccgccgccgaattccccgccaccgg 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agctgttcagtagactcagctagtgacgcgcccgcccgccgccgaattccccgccaccgg 550
Query: 1984 agcgggtatgacgctcaccttttgagaatgccgcttcagcacttgcagctccttggggct 2043
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 551 agcgggtatgacgctcaccttctgagagtgccgcttcagcacttgcagctccttggggct 610
Query: 2044 ggtgcgggtgcagatggccagcgtgagcgtatagtcgaactggtgcacgatcaggttcag 2103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ggtgcgggtgcagatggccagcgtgagcgtatagtcgaactggtgcacgatcaggttcag 670
Query: 2104 atagacggtctcctcccaatcgatctccgggtctccgatgggcagcttcttggagtcctt 2163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atagacggtctcctcccaatcgatctccgggtctccgatgggcagcttcttggagtcctt 730
Query: 2164 ccgaaacacctccacgtccgtctgcgaacgaagaggccggccgggcggcgggtgagtcga 2223
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 731 ccgaaacacctccacgtccgtctgcgaacgannnnnccggccgggcggcgggtgnntcga 790
Query: 2224 aaatctcgttgcgacgtatcgtggtacgagccaagtaccgcattgtga 2271
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 aaatctcgttgcgacgtatcgtggtacgagccaagtaccgcattgtga 838
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 191,628
Number of extensions: 2921
Number of successful extensions: 2921
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2920
Number of HSP's successfully gapped: 1
Length of query: 2446
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2429
Effective length of database: 8,119,229
Effective search space: 19721607241
Effective search space used: 19721607241
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)