BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13301 (UTR included)
(1651 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_17_C1 1390 0.0
>BF14_17_C1
Length = 1049
Score = 1390 bits (701), Expect = 0.0
Identities = 707/709 (99%)
Strand = Plus / Plus
Query: 433 ccttgcagtgtatctatgtttaagggtcaaattttattatttcattaagtttcgaattat 492
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4 ccttgcagtgtatctatgtttaagtttcaaattttattatttcattaagtttcgaattat 63
Query: 493 cagcaatgatgaagactgcggtaacagtcttgcaagagttaatgttaaaattaggtttag 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cagcaatgatgaagactgcggtaacagtcttgcaagagttaatgttaaaattaggtttag 123
Query: 553 tgccagaatatgaatgtgtgtctcagtcaggcccccaacatcaagcaatgtttgaatatc 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tgccagaatatgaatgtgtgtctcagtcaggcccccaacatcaagcaatgtttgaatatc 183
Query: 613 gttgtaccgtatatggttgtgatgcttctggtcttgctcgttctaaaaaagaagctaagc 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gttgtaccgtatatggttgtgatgcttctggtcttgctcgttctaaaaaagaagctaagc 243
Query: 673 aggaagcagcacgatatatgttgcaaaagctattcgcgcgtggtctgaatgtgcctgccc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aggaagcagcacgatatatgttgcaaaagctattcgcgcgtggtctgaatgtgcctgccc 303
Query: 733 cttatgccacaatgccatgtgagcaagagcggccatcttcacctccatctcccaacaaca 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cttatgccacaatgccatgtgagcaagagcggccatcttcacctccatctcccaacaaca 363
Query: 793 atcctgctcttgagccaggcccttcagcagctacgggaaggagcacactgccactagaca 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atcctgctcttgagccaggcccttcagcagctacgggaaggagcacactgccactagaca 423
Query: 853 ctcgaagctatgttgcactattgaaggagctaagcgaacagtatcatcttggagagccac 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctcgaagctatgttgcactattgaaggagctaagcgaacagtatcatcttggagagccac 483
Query: 913 agtatgagctcgttagcgacacaggtcctgcccaccatcgtcacttcagcattcgcgtca 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agtatgagctcgttagcgacacaggtcctgcccaccatcgtcacttcagcattcgcgtca 543
Query: 973 gtttgggcttacactcgcgacagtgtacatccacaacaaaaaaagcagcccgtcaacttg 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gtttgggcttacactcgcgacagtgtacatccacaacaaaaaaagcagcccgtcaacttg 603
Query: 1033 cagcagaacaactatacacctatcttcgtgataacctttctagactcactggcgactttg 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cagcagaacaactatacacctatcttcgtgataacctttctagactcactggcgactttg 663
Query: 1093 ttgaggaggaagccttggcgcgtgctctcgagaaatccttaaagaaaaa 1141
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ttgaggaggaagccttggcgcgtgctctcgagaaatccttaaagaaaaa 712
Score = 260 bits (131), Expect = 6e-69
Identities = 134/135 (99%)
Strand = Plus / Plus
Query: 1517 gatgaatccaaacggctgaatggtcaggaggcattgaacgcaaaaggctcagctgtagac 1576
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gatgaatccaaacggctgagtggtcaggaggcattgaacgcaaaaggctcagctgtagac 905
Query: 1577 acagagcaagcattagaaagtgtatgcagtgcgttgggcctgcgagttgaaggcggtgtg 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 acagagcaagcattagaaagtgtatgcagtgcgttgggcctgcgagttgaaggcggtgtg 965
Query: 1637 tcatgcggcgaaact 1651
|||||||||||||||
Sbjct: 966 tcatgcggcgaaact 980
Score = 204 bits (103), Expect = 3e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1141 aaaggttgtaacatggacactgccatgaatcgtttcgctgaactacatgaaatggctggt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaaggttgtaacatggacactgccatgaatcgtttcgctgaactacatgaaatggctggt 803
Query: 1201 cactgtctggacctgggacaacggatctcagagtatcacaatg 1243
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cactgtctggacctgggacaacggatctcagagtatcacaatg 846
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 210,187
Number of extensions: 4316
Number of successful extensions: 4316
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4316
Number of HSP's successfully gapped: 3
Length of query: 1651
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1634
Effective length of database: 8,119,229
Effective search space: 13266820186
Effective search space used: 13266820186
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)