BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13305 (UTR included)
(1762 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1314_C1 652 0.0
>BF14_1314_C1
Length = 1322
Score = 652 bits (329), Expect = 0.0
Identities = 345/352 (98%)
Strand = Plus / Minus
Query: 1161 tgtactactgttcactgcatgtccgtattaatgagatatatgttatatggtaacaggtcc 1220
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1312 tgtactaatgttcactgcatgtccgtattaatgagatatatgttatatggtnnnnngtcc 1253
Query: 1221 tcggatctcagcatgttacgttgtgcttcatatgctctgtgagacgcctatcctatcacg 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 tcggatctcagcatgttacgttgtgcttcatatgctctgtgagacgcctatcctatcacg 1193
Query: 1281 ggacgtccgttaatcccggccgtgtgtatcgtgtcaggcttgcggtggttcgtccagcgg 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 ggacgtccgttaatcccggccgtgtgtatcgtgtcaggcttgcggtggttcgtccagcgg 1133
Query: 1341 attggctcgcggcaggtcgggtccgtgtgtgtcggtcgtgtcgtgttcttcccgcgtgtc 1400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 attggctcgcggcaggtcgggtccgtgtgtgtcggtcgtgtcgtgttcttcccgcgtgtc 1073
Query: 1401 tgtcgtgtcgttctcgtcacgttgctcggtcgtgtccggttggctggagcttgaaccgct 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 tgtcgtgtcgttctcgtcacgttgctcggtcgtgtccggttggctggagcttgaaccgct 1013
Query: 1461 gcggctggacgagggcgtgctcgtctcgcactggtcggatgtaccagaatct 1512
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1012 gcggctggacgagggagtgctcgtctcgcactggtcggatgtaccagaatct 961
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,668
Number of extensions: 6464
Number of successful extensions: 6464
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6463
Number of HSP's successfully gapped: 1
Length of query: 1762
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1745
Effective length of database: 8,119,229
Effective search space: 14168054605
Effective search space used: 14168054605
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)