BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13308 (UTR included)
(1996 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1314_C1 2476 0.0
>BF14_1314_C1
Length = 1322
Score = 2476 bits (1249), Expect = 0.0
Identities = 1296/1312 (98%), Gaps = 1/1312 (0%)
Strand = Plus / Plus
Query: 339 gaagtattgtaagttgtcacgtttaacaaatagatgttatttgttaattatcgtccaaac 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagtattgtaagttgtcacgtttaacaaatagatgttatttgttaattatcgtccaaac 60
Query: 399 cttt-atgtgtttatggaaacgatccatccatcatttttattaatttcgagcctttttaa 457
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttttatgtgtttatggaaacgatccatccatcatttttattaatttcgagcctttttaa 120
Query: 458 ttagttatacttagtttgataagtgctgtatataaaacttaaaatgtccaaagaaaacac 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagttatacttagtttgataagtgctgtatataaaacttaaaatgtccaaagaaaacac 180
Query: 518 tgaaactgaaaatggtgaatcctccgtaacaactgaagagataagtgaaaaacgcatagg 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaaactgaaaatggtgaatcctccgtaacaactgaagagataagtgaaaaacgcatagg 240
Query: 578 ttgtgctcattacaaacgtagagctaaatttgtgactccatgctgcaacaaactgtacat 637
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtgctcattacaaacgaagagctaaatttgtgactccatgctgcaacaaactgtacat 300
Query: 638 gtgccgctactgccatgatgagaaggaagaacattatttcaacaggaaatctgtaacaga 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgccgctactgccatgatgagaaggaagaacattatttcaacaggaaatctgtaacaga 360
Query: 698 actcatttgtactgagtgtgacacaagacagaaggtccaggcaaaatgtattaaatgtgg 757
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actcatttgtactgaatgtgacacaagacagaaggtccaggcaaaatgtattaaatgtgg 420
Query: 758 agtcacatttggaaagtacacatgtctgatctgtaatctgtttgatgacgaggacaagaa 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtcacatttggaaagtacacatgtctgatctgtaatctgtttgatgacgaggacaagaa 480
Query: 818 gcagtatcactgtgatggatgtggcatctgtagagtgggcggacgggataggttctttca 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcagtatcactgtgatggatgtggcatctgtagagtgggcggacgggataggttctttca 540
Query: 878 ttgtgaacgctgcaacatgtgtctcccagtgcagttgcaagaagtcggccataggtgtgt 937
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 541 ttgtgaacgctgcaacatgtgtctccctgtgcagttgcaagaagtcggccataggtgtgt 600
Query: 938 agagaatgtgtcccgtgcaaactgtcccgtgtgtcttgaggacatacacacatcccggat 997
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 agagaatgtgtcccgtgcaaactgtcccgtgtgtcttgaggacatacacacgtcccggat 660
Query: 998 cccgtgccacataccagactgcggccatctccttcacagaccgtgctttgaacagatgct 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cccgtgccacataccagactgcggccatctccttcacagaccgtgctttgaacagatgct 720
Query: 1058 tcgctcgggacattacgcctgccctacctgccagaccagcatgattgatatgaccaatct 1117
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 721 tcgctcgggacactacgcctgccctacctgccagaccagcatgatcgatatgaccaatct 780
Query: 1118 gtggaattatttggactcagaagttgccgctacaccgatgccaccggaatatgcaaacta 1177
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 781 gtggaattatttggactcagaagtagccgctacaccgatgccaccggaatatgcaaacta 840
Query: 1178 taagaccactatactatgcaaggattgtcacaagttgtcgactgttaagtttcatgtggt 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 taagaccactatactatgcaaggattgtcacaagttgtcgactgttaagtttcatgtggt 900
Query: 1238 cggtctgaagtgtcaacactgcggtggctacaacacgtgccagacaaacggctttcacaa 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cggtctgaagtgtcaacactgcggtggctacaacacgtgccagacaaacggctttcacaa 960
Query: 1298 agattctggtacatccgaccagtgcgagacgagcacgccctcgtccagccgcagcggttc 1357
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 961 agattctggtacatccgaccagtgcgagacgagcactccctcgtccagccgcagcggttc 1020
Query: 1358 aagctccagccaaccggacacgaccgagcaacgtgacgagaacgacacgacagacacgcg 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aagctccagccaaccggacacgaccgagcaacgtgacgagaacgacacgacagacacgcg 1080
Query: 1418 ggaagaacacgacacgaccgacacacacggacccgacctgccgcgagccaatccgctgga 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggaagaacacgacacgaccgacacacacggacccgacctgccgcgagccaatccgctgga 1140
Query: 1478 cgaaccaccgcaagcctgacacgatacacacggccgggattaacggacgtcccgtgatag 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cgaaccaccgcaagcctgacacgatacacacggccgggattaacggacgtcccgtgatag 1200
Query: 1538 gataggcgtctcacagagcatatgaagcacaacgtaacatgctgagatccgaggacctgt 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gataggcgtctcacagagcatatgaagcacaacgtaacatgctgagatccgaggacnnnn 1260
Query: 1598 taccatataacatatatctcattaatacggacatgcagtgaacagtagtaca 1649
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1261 naccatataacatatatctcattaatacggacatgcagtgaacattagtaca 1312
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,789
Number of extensions: 8270
Number of successful extensions: 8270
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8268
Number of HSP's successfully gapped: 1
Length of query: 1996
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1979
Effective length of database: 8,119,229
Effective search space: 16067954191
Effective search space used: 16067954191
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)