BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13316 (UTR included)
(4459 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2H10 1493 0.0
BF01022A1D02 967 0.0
>BF01055B2H10
Length = 801
Score = 1493 bits (753), Expect = 0.0
Identities = 759/761 (99%)
Strand = Plus / Plus
Query: 1630 atcgacaatgtggtaacggacgactggatgagggagaggaatgcgactgcggcaccatct 1689
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgacaatgtggtaacggaagactggatgagggagaggaatgcgactgcggcaccatct 60
Query: 1690 cggaatgtcaacacatgaactcctgttgcgatccctttacctgcagactcactaaggagg 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggaatgtcaacacatgaactcctgttgcgatccctttacctgcagactcactaaggagg 120
Query: 1750 ctcagtgtgctgagggtgaatgctgtgaaaagtgtcagcttaaacatcgcgggatagttt 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcagtgtgctgagggtgaatgctgtgaaaagtgtcagcttaaacatcgcgggatagttt 180
Query: 1810 gtcgggaagcgacgaatgagtgtgatttagaagagacgtgcaccggtctttctggagctt 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgggaagcgacgaatgagtgtgatttagaagagacgtgcaccggtctttctggagctt 240
Query: 1870 gtccaagtgatgcgtaccgaaagaatggtgagccttgcgaatccggtaaaggatattgtt 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtccaagtgatgcgtaccgaaagaatggtgagccttgcgaatccggtaaaggatattgtt 300
Query: 1930 ttgctggtcaatgtcctacgctgtccacacagtgtgagaaaatctggggccctggtgcca 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgctggtcaatgtcctacgctgtccacacagtgtgagaaaatctggggccctggtgcca 360
Query: 1990 atggcgctgataaagagtgctttgaacagttcaactccaagggttcgatgaccggacatt 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggcgctgataaagagtgctttgaacagttcaactccaagggttcgatgaccggacatt 420
Query: 2050 gcgggaaagattcgagtggaaatttcatgaaatgtgaaactgagaatgtgagatgcggtt 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcgggaaagattcgagtggaaatttcatgaaatgtgaaactgagaatgtgagatgcggtt 480
Query: 2110 ctcttcaatgtcaatccgggaacagatacccagtagtatccggcatggatgattactaca 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctcttcaatgtcaatccgggaacagatacccagtagtatccggcatggatgattactaca 540
Query: 2170 ccagaactgttatcacgattaagggccaagagtatgattgcaaagcaacaactggtgtcc 2229
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 541 ccagaactgttatcacgattaagggccaagagtatgattgcaaagcaacaactggtgttc 600
Query: 2230 ctgacctcgcggacacaatgcgcctggggctggttcgtgatggcaccccgtgtggtgaca 2289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgacctcgcggacacaatgcgcctggggctggttcgtgatggcaccccgtgtggtgaca 660
Query: 2290 acctgatatgcgtcaaccagacctgcacatccatcttcccatacatagatcacacgaaat 2349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acctgatatgcgtcaaccagacctgcacatccatcttcccatacatagatcacacgaaat 720
Query: 2350 gtcccacggatcataacaataacgaatgctcggcaaaaggg 2390
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtcccacggatcataacaataacgaatgctcggcaaaaggg 761
Score = 73.8 bits (37), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 2508 atgtgttcaaacctgaacaagtgcgtgtgcaaccgtggct 2547
|||||||||||||||||| |||||||||||||||||||||
Sbjct: 762 atgtgttcaaacctgaacnagtgcgtgtgcaaccgtggct 801
>BF01022A1D02
Length = 821
Score = 967 bits (488), Expect = 0.0
Identities = 497/500 (99%)
Strand = Plus / Plus
Query: 3212 agaacatacgggtgcagtggctgacatggagtataagtttaaggatctaaacggatatca 3271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaacatacgggtgcagtggctgacatggagtataagtttaaggatctaaacggatatca 60
Query: 3272 cgaaaacataatagtagcgcttaagactgcagccgcccaacgagcgagtgcagggcaagc 3331
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 cgaaaacataatagtagcgcttaagactgcagccgcccaaagagcgagtgcagggcaagc 120
Query: 3332 cgttggttcaggggacctgagagctttacaggaatatgaatataaacgagaaagagtacc 3391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgttggttcaggggacctgagagctttacaggaatatgaatataaacgagaaagagtacc 180
Query: 3392 cagtgcagagaaaatacacgaaacagaacttcggagacaaagaggcgatgaagaagaaga 3451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 cagtgcagagaaaatacacgaaacagaacttcggagacaaagaggcgatgaagaagagga 240
Query: 3452 cgaagcgccaccgtgcgggcccatcagaatcaggaacttagaagatttaattaggcaact 3511
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 241 cgaagcgccaccgtgcgggcccatcagaatcaggaacttagaagatttaataaggcaact 300
Query: 3512 ggaacaccattccagcagacatatgagcccatccgggtctgaagatattcgaatgtcaga 3571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaacaccattccagcagacatatgagcccatccgggtctgaagatattcgaatgtcaga 360
Query: 3572 gaccgaagccgaccgtcattataggattgaaggcgaggtgccacctcgatgccgaggccg 3631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaccgaagccgaccgtcattataggattgaaggcgaggtgccacctcgatgccgaggccg 420
Query: 3632 gatccctccaacggaagaggaggcccgtttcggctacccgcggttcaggggcagcacgcg 3691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatccctccaacggaagaggaggcccgtttcggctacccgcggttcaggggcagcacgcg 480
Query: 3692 tcatcatcccgctatgttcg 3711
||||||||||||||||||||
Sbjct: 481 tcatcatcccgctatgttcg 500
Score = 502 bits (253), Expect = e-141
Identities = 253/253 (100%)
Strand = Plus / Plus
Query: 3711 gcgcacggagctcttcgtgccccacccgacgatgacgctctgtatgaaaccgctgatgcg 3770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gcgcacggagctcttcgtgccccacccgacgatgacgctctgtatgaaaccgctgatgcg 628
Query: 3771 gaaagattacgggatgcccccgacagtgagagtgatgaatttattcaagctcaacaacag 3830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gaaagattacgggatgcccccgacagtgagagtgatgaatttattcaagctcaacaacag 688
Query: 3831 ttagcccggtgggcgagtgaagaggctgtacccggccgcgagtacttcccgtcgccacac 3890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttagcccggtgggcgagtgaagaggctgtacccggccgcgagtacttcccgtcgccacac 748
Query: 3891 tccccgcgctccccggccggcagctccgccagcgagcttccagccgccttccccgagtac 3950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tccccgcgctccccggccggcagctccgccagcgagcttccagccgccttccccgagtac 808
Query: 3951 aagcactgacact 3963
|||||||||||||
Sbjct: 809 aagcactgacact 821
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 383,690
Number of extensions: 6231
Number of successful extensions: 6231
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6231
Number of HSP's successfully gapped: 4
Length of query: 4459
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4441
Effective length of database: 8,109,745
Effective search space: 36015377545
Effective search space used: 36015377545
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)