BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13319 (UTR included)
(2383 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A2H05 1459 0.0
>BF01044A2H05
Length = 768
Score = 1459 bits (736), Expect = 0.0
Identities = 760/768 (98%)
Strand = Plus / Plus
Query: 515 aactccagcgctagatttacaatcggagtatttaaaacatggcgatgaaagcgtttatga 574
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 aactccagcgctagatttacaatcggagtatttaaaacatggcgacgaaagcgtttatga 60
Query: 575 gcttaattttcttgttatcggaggatgtgacgggaggcatctcattaaaaccttggcaca 634
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 61 gcttaattttcttgttatcggaggatgtgatggaaggcatctcattaaaaccttggcaca 120
Query: 635 ggcctatcggcacacaagacggtacatgaatttgttcgttattgatggctgcccggaact 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcctatcggcacacaagacggtacatgaatttgttcgttattgatggctgcccggaact 180
Query: 695 cgtggctcgtcaaattcttctcttgtcacttgctctagagaaaacaacaagattcggtct 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgtggctcgtcaaattcttctcttgtcacttgctctagagaaaacaacaagattcggtct 240
Query: 755 acttgaaaaatcaaggcggttcctggaaatttatggcaacttactgttgagaccaccaac 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttgaaaaatcaaggcggttcctggaaatttatggcaacttactgttgagaccaccaac 300
Query: 815 ttcgaggtatttgattgcaaaagcacaacaactagtcagcatgataacaaaccctgatta 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcgaggtatttgattgcaaaagcacaacaactagtcagcatgataacaaaccctgatta 360
Query: 875 catgagttgtctcctgccttgcgtgtcagtggatcaaatgaagtatcgcgagagagatta 934
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catgagttgtctcctcccttgcgtgtcagtggatcaaatgaagtatcgcgagagagatta 420
Query: 935 tatggagactcttatgaatttttggacaacgggtaacacgaaccagttcaatgcttgcga 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatggagactcttatgaatttttggacaacgggtaacacgaaccagttcaatgcttgcga 480
Query: 995 actttgggaacatcgcctcaggcatactctgggtctcaggtatgacaaccgcatgggagt 1054
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 481 actttgggaacatcgcctcaggcatactctaggtctcaggtatgacaaccgcatgggagt 540
Query: 1055 ttatgactgggattatcatatgcgcttaaaggaattggctagtcaaatatgttttccaga 1114
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 541 ttatgactgggattatcatatgcgcttaaaggaattggctagtcaaatatgctttccaga 600
Query: 1115 gtataagcatttcagagagcacggtgtcgcttttacgtggttggagacggaggtctgtcg 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtataagcatttcagagagcacggtgtcgcttttacgtggttggagacggaggtctgtcg 660
Query: 1175 tccaaatgtgtctttagctgctggagtttgtaaatgcggggatcgctaccttcatcgagg 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tccaaatgtgtctttagctgctggagtttgtaaatgcggggatcgctaccttcatcgagg 720
Query: 1235 atatcttggcgacctggtgacctccccgtacatagcctatggtctgga 1282
|||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 721 atatcttggcgatctggtgacctccccgtacatagcctatggtttgga 768
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,523
Number of extensions: 4593
Number of successful extensions: 4593
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4593
Number of HSP's successfully gapped: 1
Length of query: 2383
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2366
Effective length of database: 8,119,229
Effective search space: 19210095814
Effective search space used: 19210095814
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)