BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13326 (UTR included)
(1468 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 123 8e-28
BF01014B2F02 121 3e-27
BF01020A1F03 105 2e-22
BF14_335_C2 98 5e-20
BF14_335_C4 92 3e-18
BF01056B2D01 90 1e-17
BF01049B1F01 78 4e-14
BF01044A1D01 76 2e-13
BF01017A1F03 76 2e-13
BF01022B1H01 70 1e-11
BF01016A2B02 68 4e-11
>BF01019A1H08
Length = 504
Score = 123 bits (62), Expect = 8e-28
Identities = 104/116 (89%), Gaps = 4/116 (3%)
Strand = Plus / Minus
Query: 545 ccttaagcctacacctgggtcgcaagtcc-aggctctgttgaagctcctctccctgcag- 602
|||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 479 ccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaac 420
Query: 603 --gttggacccggcacccgcgcggtgaatccattgaatgctgagaggtttcgtctc 656
| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 419 gcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctc 364
>BF01014B2F02
Length = 623
Score = 121 bits (61), Expect = 3e-27
Identities = 96/105 (91%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 554 tacacctgggtcgcaagtcc-aggctctgttgaagctcctctccctgcag-gttggaccc 611
|||||||||||||||||||| |||| ||| ||||||||||||||||||| | |||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 612 ggcacccgcgcggtgaatccattgaatgctgagaggtttcgtctc 656
||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 563 ggcacccgcacggtgcatccactgaatgctgagaggtttcgtctc 519
>BF01020A1F03
Length = 739
Score = 105 bits (53), Expect = 2e-22
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 671 tcacagaaaaaacaggctaccagtcaccatatggagggatggacaatggaatg 723
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tcacagaaaaaacaggctaccagtcaccatatggagggatggacaatggaatg 132
>BF14_335_C2
Length = 1827
Score = 97.6 bits (49), Expect = 5e-20
Identities = 100/115 (86%), Gaps = 4/115 (3%)
Strand = Plus / Minus
Query: 546 cttaagcctacacctgggtcgcaagtcc-aggctctgttgaagctcctctccctgcag-- 602
||||| |||||||||| ||||||| ||| |||| |||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 603 -gttggacccggcacccgcgcggtgaatccattgaatgctgagaggtttcgtctc 656
| ||||||||||||||| |||||||||||| ||| ||| ||||||||||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctc 808
>BF14_335_C4
Length = 1491
Score = 91.7 bits (46), Expect = 3e-18
Identities = 101/116 (87%), Gaps = 5/116 (4%)
Strand = Plus / Plus
Query: 545 ccttaagcctacacctgggtcgcaagt-ccaggctctgttgaagctcctctccctgca-- 601
|||||| |||||||||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct: 1250 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaac 1308
Query: 602 -ggttggacccggcacccgcgcggtgaatccattgaatgctgagaggtttcgtctc 656
| ||| ||| ||| |||| |||||||||||| |||||||||||| |||||||||
Sbjct: 1309 gcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctc 1364
>BF01056B2D01
Length = 728
Score = 89.7 bits (45), Expect = 1e-17
Identities = 77/87 (88%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 572 ccaggctctgttgaagctcctctccctgcag---gttggacccggcacccgcgcggtgaa 628
|||||| ||||||||||||||||||||||| | |||||||||||||||| |||||||
Sbjct: 163 ccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaa 104
Query: 629 tccattgaatgctgagaggtttcgtct 655
| ||| ||||| |||||||||||||||
Sbjct: 103 ttcatggaatgttgagaggtttcgtct 77
>BF01049B1F01
Length = 840
Score = 77.8 bits (39), Expect = 4e-14
Identities = 49/51 (96%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 552 cctacacctgggtcgcaagtcc-aggctctgttgaagctcctctccctgca 601
|||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 640 cctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
>BF01044A1D01
Length = 742
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 612 ggcacccgcgcggtgaatccattgaatgctgagaggtttcgtctcg 657
||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 738 ggcacccgcacggtgaagccattgaatgctgagaggtttcgtctcg 693
>BF01017A1F03
Length = 782
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 606 ggacccggcacccgcgcggtgaatccattgaatgctgagaggtttcgtctcgtc 659
||||||||||||||| ||||| |||||| ||||||||||||| |||||||||||
Sbjct: 296 ggacccggcacccgcacggtgtatccatggaatgctgagaggattcgtctcgtc 349
>BF01022B1H01
Length = 596
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 622 cggtgaatccattgaatgctgagaggtttcgtctcgtct 660
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 cggtgaatccattgaatgctaagaggtttcgtctcgtct 39
>BF01016A2B02
Length = 780
Score = 67.9 bits (34), Expect = 4e-11
Identities = 50/54 (92%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 546 cttaagcctacacctgggtcgcaagtcc-aggctctgttgaagctcctctccct 598
|||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||
Sbjct: 283 cttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctccct 230
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,120
Number of extensions: 22104
Number of successful extensions: 22104
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 22096
Number of HSP's successfully gapped: 13
Length of query: 1468
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1451
Effective length of database: 8,119,229
Effective search space: 11781001279
Effective search space used: 11781001279
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)