BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13340 (UTR included)
(2884 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1C08 995 0.0
BF14_2139_C1 274 7e-73
>BF01025B1C08
Length = 661
Score = 995 bits (502), Expect = 0.0
Identities = 511/514 (99%)
Strand = Plus / Minus
Query: 838 aggtagtccgcagtgtaaaggcatgtcagggtgtaatctttttagttgatgctaatgagg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggtagtccgcagtgtaaaggcatgtcagggtgtaatctttttagttgatgctaatgagg 505
Query: 898 gcatacaagctcaaacagtcgctgtacactcattagcaaagagaaataatctagttataa 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcatacaagctcaaacagtcgctgtacactcattagcaaagagaaataatctagttataa 445
Query: 958 tacctacattgaataaagttgatttgcctcgagctaacccagaaaatgttaaagctcaat 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacctacattgaataaagttgatttgcctcgagctaacccagaaaatgttaaagctcaat 385
Query: 1018 taaaatcattattctatatagaaccagatacagttttgagtatatctgccaagaaggggt 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaaatcattattctatatagaaccagatacagttttgagtatatctgccaagaaggggt 325
Query: 1078 ggggtgtgccagagctgatagaagctgttatatccagaatacctccaccaacagtagaag 1137
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 ggggtgtgccagagctgatagaagctgttatatctagaatacctccaccaacagtagaag 265
Query: 1138 ttaggaaaccttttagagcctcaataatagacacctggcatgataaatttagagggatta 1197
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctaggaaaccttttagagcctcaataatagacacctggcatgataaatttagagggatta 205
Query: 1198 tgtgtttggcttatatagaatcagggtcagtggaagtgggtgaaactgtgcggtggagat 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgtgtttggcttatatagaatcagggtcagtggaagtgggtgaaactgtgcggtggagat 145
Query: 1258 ctgacagcaaaccgcatgtcctcaaatacttagcattattgcggcctaatgaagaaccaa 1317
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 144 ctgacagcaaaccgcatgtccttaaatacttagcattattgcggcctaatgaagaaccaa 85
Query: 1318 taaaaaaggctgtagccgggcaagttgtgatggt 1351
||||||||||||||||||||||||||||||||||
Sbjct: 84 taaaaaaggctgtagccgggcaagttgtgatggt 51
>BF14_2139_C1
Length = 1020
Score = 274 bits (138), Expect = 7e-73
Identities = 151/155 (97%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 41 tacctgcacatgatctcgttttccatatttttagtaataatatgattatagctaacagat 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tacctgcacatgatctcgttttccatatttttagtaataatatgattatagctaacagat 96
Query: 101 gggacaagtccgcaagtaaacggaaaatattcatgatttatgttttggaaaa-gcctaaa 159
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 95 gggacaagtccgcaagtaaacggaaaatattcatgatttatgttttggaaaannnntaaa 36
Query: 160 ttatgcgccgcgtaaactaacacttaacaatcttc 194
|||||||||||||||||||||||||||||||||||
Sbjct: 35 ttatgcgccgcgtaaactaacacttaacaatcttc 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 413,217
Number of extensions: 9131
Number of successful extensions: 9131
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9130
Number of HSP's successfully gapped: 2
Length of query: 2884
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2867
Effective length of database: 8,119,229
Effective search space: 23277829543
Effective search space used: 23277829543
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)