BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13346 (UTR included)
(3343 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1129_C1 1661 0.0
BF14_1783_C1 1316 0.0
BF14_335_C2 113 2e-24
BF01043B1E03 74 2e-12
>BF14_1129_C1
Length = 858
Score = 1661 bits (838), Expect = 0.0
Identities = 853/858 (99%)
Strand = Plus / Plus
Query: 1606 aattatctccagctgaaagagcggctgctattcattctttagcagatttgttactagata 1665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattatctccagctgaaagagcggctgctattcattctttagcagatttgttactagata 60
Query: 1666 aaaaagacaaaatattggaagcgaatgcgaaagacttggaggaagctacaaaaactggac 1725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaagacaaaatattggaagcgaatgcgaaagacttggaggaagctacaaaaactggac 120
Query: 1726 tagagaaaccactcttaaataggttatcacttagtccaggaaaactgaagacattatcaa 1785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagagaaaccactcttaaataggttatcacttagtccaggaaaactgaagacattatcaa 180
Query: 1786 ttggtttaaaacaaattgcagattcaagctatgataatgtcgggagggtattgagaaaga 1845
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 181 ttggtttaaaacaaattgcagattcaagctatgataatgtcgggagggtattgcggaaga 240
Query: 1846 ccaaacttgctgaaaatttattattaaaacaagtaacagttcctattggcgtcttacttg 1905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaaacttgctgaaaatttattattaaaacaagtaacagttcctattggcgtcttacttg 300
Query: 1906 ttatatttgaatcaagacctgattcactgcctcaagttgctgcattagcaatggcgtctg 1965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttatatttgaatcaagacctgattcactgcctcaagttgctgcattagcaatggcgtctg 360
Query: 1966 gtaacggactcttactaaaaggtgggaaagaggcagcttactcaaatagagcattgatgg 2025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaacggactcttactaaaaggtgggaaagaggcagcttactcaaatagagcattgatgg 420
Query: 2026 aaatcgttaaagagtctcttcagccatttggcgcgtcagatgccgtttcattggtctcaa 2085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaatcgttaaagagtctcttcagccatttggcgcgtcagatgccgtttcattggtctcaa 480
Query: 2086 ctagagatgaaataagtgatttactagcaatggaaaagcatattgatttgattattcctc 2145
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 ctagagatgaaataagtgatttactagcgatggaaaagcatattgatttgattattcctc 540
Query: 2146 gtggttcttctgaactagttagaaatattcaaaagcagtcacaacatattcctgtattgg 2205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtggttcttctgaactagttagaaatattcaaaagcagtcacaacatattcctgtattgg 600
Query: 2206 gtcacgctgaaggaatttgtcatgtatatttagacaaagatgccgatccaagcaaggcgt 2265
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcacgctgaaggcatttgtcatgtatatttagacaaagatgccgatccaagcaaggcgt 660
Query: 2266 tgaagatagtccgcgacgctaaatgtgattatcctgcagcatgtaatgctatggagactt 2325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgaagatagtccgcgacgctaaatgtgattatcctgcagcatgtaatgctatggagactt 720
Query: 2326 tgcttatccatgaggatcatttgtcagggactttattccaggatatatgtaatatgttga 2385
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 721 tgcttatccatgaggatcatttgtcagggacattattccaggatatatgtaatatgttga 780
Query: 2386 aacaggaaggtgtaaaaatacacgctggtccaaagcttgctagtcaattaaccttcggac 2445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aacaggaaggtgtaaaaatacacgctggtccaaagcttgctagtcaattaaccttcggac 840
Query: 2446 cacctcctgctagaacaa 2463
||||||||||||||||||
Sbjct: 841 cacctcctgctagaacaa 858
>BF14_1783_C1
Length = 677
Score = 1316 bits (664), Expect = 0.0
Identities = 673/676 (99%)
Strand = Plus / Plus
Query: 466 aatacatgatagttattaaaaaagaattatataaaatgtgtaatttattgaacggcgtca 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aatacatgatagttattaaaaaagaattatataaaatgtgtaatttattgaacggcgtca 61
Query: 526 aagtgagtgtcttgagggctggtgctttgaggttgaataattctttcaggaacttcagtg 585
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 62 aagtgagtgtcttgagggctggtgctttgaggttaaataattctttcaggaacttcagtg 121
Query: 586 tcagatgtcagcattacggccataatgtagataagcggaatataggtagcctggatagaa 645
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 122 tcagatgtcagcattacggccataatgtagataagcggaatatagctagcctggatagaa 181
Query: 646 agaaacaaacattttctgatagatcgcaactgaagtacgccagaagattagtggtcaaac 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agaaacaaacattttctgatagatcgcaactgaagtacgccagaagattagtggtcaaac 241
Query: 706 taggaagtgctgtgatcacgagggaggatggcaatggactcgctctaggaagattagcat 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taggaagtgctgtgatcacgagggaggatggcaatggactcgctctaggaagattagcat 301
Query: 766 ctattgttgaacaggtagcagaatgtcatcatgaaggaagagaatgtattatggtaacga 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctattgttgaacaggtagcagaatgtcatcatgaaggaagagaatgtattatggtaacga 361
Query: 826 gtggtgccgtggcatttggtaggcagaagttgactcaagagttgctcatgtctctatcca 885
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 gtggtgccgtggcatttggtaggcagaagttgactcaggagttgctcatgtctctatcca 421
Query: 886 tgagggaaactctttcacccagcgatcacaccagagaggacgcgggcagtattttggacc 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgagggaaactctttcacccagcgatcacaccagagaggacgcgggcagtattttggacc 481
Query: 946 ctcgggctgcagccgcagttggtcagtcggagctgatgtccatgtatgatgttatgtttt 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctcgggctgcagccgcagttggtcagtcggagctgatgtccatgtatgatgttatgtttt 541
Query: 1006 cacaatataacgtgaaaattgctcaggtgcttgttacaaaacccgatttctacaacgagg 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cacaatataacgtgaaaattgctcaggtgcttgttacaaaacccgatttctacaacgagg 601
Query: 1066 aaacaagaaaaaacttgtttaccactctctcagagttgatatctctaaatatagtaccta 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaacaagaaaaaacttgtttaccactctctcagagttgatatctctaaatatagtaccta 661
Query: 1126 ttgtgaataccaatga 1141
||||||||||||||||
Sbjct: 662 ttgtgaataccaatga 677
>BF14_335_C2
Length = 1827
Score = 113 bits (57), Expect = 2e-24
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 3209 gaggtataacagctaaatctctgtataaactacgaaaagatttgggcctgtccagaacta 3268
|||||||||||||||||||||| || | |||| |||| | |||||||||||||||||||
Sbjct: 1105 gaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaacta 1046
Query: 3269 acatcaattctttcttagaacgtacttcgaaggcaaccctaaaaggttcgttccaaattt 3328
||| || ||| ||||| ||||||||||||||| || | ||| ||||||||| |||||||
Sbjct: 1045 acaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaattt 986
Query: 3329 ggtta 3333
|||||
Sbjct: 985 ggtta 981
>BF01043B1E03
Length = 830
Score = 73.8 bits (37), Expect = 2e-12
Identities = 111/135 (82%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 3209 gaggtataacagctaaatctctgtataaactacgaaaagatttgggcctgtccagaacta 3268
|||||||||||||| |||||| || || |||| ||| | ||| ||||| |||||||||
Sbjct: 213 gaggtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaacta 272
Query: 3269 acatcaattctttcttagaacgtacttcgaaggcaaccctaaaaggttcgttccaaattt 3328
||||||| || ||||| ||||||||| | |||||| ||| ||||| ||| |||||||
Sbjct: 273 acatcaaatcattcttggaacgtactgcaaaggcaggcct---aggtttgtttcaaattt 329
Query: 3329 ggttacgtagagaga 3343
||||| |||||||||
Sbjct: 330 ggttaggtagagaga 344
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 415,762
Number of extensions: 8661
Number of successful extensions: 8661
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 8660
Number of HSP's successfully gapped: 4
Length of query: 3343
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3325
Effective length of database: 8,109,745
Effective search space: 26964902125
Effective search space used: 26964902125
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)