BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13348 (UTR included)
(3919 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B2D04 985 0.0
>BF01038B2D04
Length = 607
Score = 985 bits (497), Expect = 0.0
Identities = 577/602 (95%), Gaps = 2/602 (0%)
Strand = Plus / Minus
Query: 3187 taaatttaactacatatgttaaatgtatggatgtcagaataaaaagtctgcaatgtctgt 3246
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 607 taaatttaactacatatgttaagtgtatggatgtcagaataaaaagtttgcaatgtctgt 548
Query: 3247 acgaaatcgcaaattcttaccagacaagattgcttttacctcataagcaggatattttaa 3306
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 acgaaatcgcaaatnnntcccagacaagattgcttttacctcataagcaggatattttaa 488
Query: 3307 tcgatttagcgccatctcttgacgataagaagcgacttgtgaggaatatggcggttaagg 3366
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcgatttagccccatctcttgacgataagaagcgacttgtgaggaatatggcggttaagg 428
Query: 3367 cccgaacaagatggtacttagttggagctccaggcgaaagtaaagaagattaataaaact 3426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cccgaacaagatggtacttagttggagctccaggcgaaagtaaagaagattaataaaact 368
Query: 3427 ctatagttgtgctttctatagttgtcggcaaaaaaaa-aaaatttgtaagcaaactttgt 3485
||||||||| ||||||||||||| ||||||||||||| | | ||||||||||||||||||
Sbjct: 367 ctatagttgggctttctatagttttcggcaaaaaaaatatattttgtaagcaaactttgt 308
Query: 3486 tactcttgagatacccaagagtagcaaagtttacttttattattccctaaagaaaacgta 3545
||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 307 tactcttgatatacccaagagcaacaaagtttacttttattattccctaaagaaaacgta 248
Query: 3546 gcttaaaaagaaaattaatttaattttgtaccttagaataaataaagttttcaaaatgat 3605
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 247 gcttaaaaagaaaattaatttaattttgtcccttagaataaataaagttttcaaaatgat 188
Query: 3606 aaactgttaaagagtgaagattgttgtctttaacaatacaaaaaaaaaaacaagtaattc 3665
|||||||| ||||||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 187 aaactgttcaagagtgaagattgttgtctttaccaatccaaaaaaaaaaa-aagtaattt 129
Query: 3666 aatggagtgtgaatcgaaattatttctgagatataaaattattagcttttgtaactttaa 3725
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 128 tatggcgtgtgaatcgaaattatttttgagatataaaattattagcttttgtaactttaa 69
Query: 3726 tgtatatcaaaatatacacaaactaatgaaacgatgttattataataaatttgttaaaaa 3785
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tgtatatcaaaatatacccaaactaatgaaacgatgttattataataaatttgttaaaaa 9
Query: 3786 aa 3787
||
Sbjct: 8 aa 7
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 616,535
Number of extensions: 26502
Number of successful extensions: 26502
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 26498
Number of HSP's successfully gapped: 1
Length of query: 3919
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3901
Effective length of database: 8,109,745
Effective search space: 31636115245
Effective search space used: 31636115245
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)