BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13370 (UTR included)
(2945 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B1B07 1320 0.0
>BF01054B1B07
Length = 697
Score = 1320 bits (666), Expect = 0.0
Identities = 683/686 (99%), Gaps = 2/686 (0%)
Strand = Plus / Plus
Query: 143 gtgctccgcgacctgcacgacgtcatcgacaggttcatgatctgctggtcgtcgtgccgg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gtgctccgcgacctgcacgacgtcatcgacaggttcatgatctgctggtcgtcgtgccgg 73
Query: 203 gcgcgcgggctccagatgtgggcgggcgcgggggagggggcgcgggcctggcggcgggcg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gcgcgcgggctccagatgtgggcgggcgcgggggagggggcgcgggcctggcggcgggcg 133
Query: 263 gcgcgccccccccgagggcggggctgcgagccgcgcgcgccgccctcaccttgcttcacg 322
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 134 gcgcgccccccc-gagggcggg-ctgcgagccgcgcgcgccgccctcaccttgcttcacg 191
Query: 323 ttccggccgcgcgcgcagccgtcgccttcccgcacccgagactgctgcaatacgactgcg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttccggccgcgcgcgcagccgtcgccttcccgcacccgagactgctgcaatacgactgcg 251
Query: 383 gtaagctgcagacgctggacggtctgctccggcggctgaaggcgggcggccaccgcgtgc 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gtaagctgcagacgctggacggtctgctccggcggctgaaggcgggcggccaccgcgtgc 311
Query: 443 tgatcttcactcagatgacgagggtgctggacgtgctggaggcgtttctctgtatgcacg 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgatcttcactcagatgacgagggtgctggacgtgctggaggcgtttctctgtatgcacg 371
Query: 503 gccacgcctacctccgcctggacggcgccacccgtgtggatcagcgccagccgctcgtgg 562
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 372 gccacgcctacctccgcctggacggcgccacccgtgtggatcagcgccaaccgctcgtgg 431
Query: 563 accgattcaacgcggatcctcgaattttcgctttcatcctgtccacgcgcagcggcggcg 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 accgattcaacgcggatcctcgaattttcgctttcatcctgtccacgcgcagcggcggcg 491
Query: 623 tcggcctcaacctcaccggagcggactccgtggtgttctacgactcggactggaacccca 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcggcctcaacctcaccggagcggactccgtggtgttctacgactcggactggaacccca 551
Query: 683 ccatggacgcgcaggctcaggaccgctgccaccggatcggtcagacgcgcgacgtgcacg 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccatggacgcgcaggctcaggaccgctgccaccggatcggtcagacgcgcgacgtgcacg 611
Query: 743 tgttccgcctcgtcaccacggccaccgtcgaagagaacattctgcgcaaggccgaacaga 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgttccgcctcgtcaccacggccaccgtcgaagagaacattctgcgcaaggccgaacaga 671
Query: 803 aacggaccctcggccacctcgccatc 828
||||||||||||||||||||||||||
Sbjct: 672 aacggaccctcggccacctcgccatc 697
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 220,117
Number of extensions: 4719
Number of successful extensions: 4719
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4717
Number of HSP's successfully gapped: 1
Length of query: 2945
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2927
Effective length of database: 8,109,745
Effective search space: 23737223615
Effective search space used: 23737223615
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)