BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13376 (UTR included)
(1813 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 254 4e-67
BF01043B1E03 167 8e-41
BF01047B2H03 167 8e-41
BF14_335_C4 167 8e-41
BF01060B1D11 141 4e-33
BF01019A1H08 135 3e-31
BF01016B1E06 101 4e-21
BF01031B2E06 94 9e-19
BF01017A1F03 90 1e-17
BF14_335_C5 88 6e-17
BF01049B1F01 82 4e-15
BF01021A2B11 74 9e-13
BF01048A1E04 74 9e-13
BF01014B2F02 68 5e-11
>BF14_335_C2
Length = 1827
Score = 254 bits (128), Expect = 4e-67
Identities = 401/489 (82%), Gaps = 31/489 (6%)
Strand = Plus / Minus
Query: 958 acatatttttatattcgcgaattttaaagcgctttgtgatgatagagcttacggttcctt 1017
|||||||| | ||||||||||||||||||||| | | | ||||||| |||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 1018 gggaaaccaacattcccaaagaccataccatcaaggtcaacaaatattatgagctcacta 1077
|| | |||||||| |||||| ||||| |||||||||||||||| ||||||||||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
Query: 1078 acgaactcactcgaaataggttcgtcgtgga-tttatacgtggtagaagtgggagc---- 1132
| ||||||||||| | | ||| |||||||||||||||||||
Sbjct: 1157 ------------ggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagt 1110
Query: 1133 --gagaggtgtaacggctaaatctctctacaacctactaaaagacttgggcctgtgcaga 1190
||||||| |||| |||||||||||||||| |||||||||| |||||||||||| ||||
Sbjct: 1109 gagagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccaga 1050
Query: 1191 actcacatcaattcattcttggaacggacttcgaaggcagtcctagtaggttcttttcaa 1250
||| ||| || ||||||||| ||||| ||||||||| ||| ||||||||||| ||||||
Sbjct: 1049 actaacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaa 990
Query: 1251 atttggttaggtagggagaggagcttggacattggagttgagcgt--ttaacgcgcgtta 1308
|||||||||| | ||||||||||||||| ||||| ||||||| | ||||| ||||
Sbjct: 989 atttggttag---gagagaggagcttggacggtggaggtgagcgttatgtacgcgagtta 933
Query: 1309 gttaaaggccccttaaacctacacttgggtcgcaagtcccaggcactgt-----gtcctc 1363
| | | || | ||||||||||||| || ||||||| ||||||||||||| |||||
Sbjct: 932 gat-aggggctcttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctc 874
Query: 1364 tccctgaaacgcgatggacccggcaccccgcacggtgaatccattgaatgctaagagatt 1423
|||||| |||||| |||||||||| |||||||||||||||||| ||| |||||||| ||
Sbjct: 873 tccctgcaacgcggcggacccggca-cccgcacggtgaatccatagaaagctaagaggtt 815
Query: 1424 tcgtctctt 1432
|||||||||
Sbjct: 814 tcgtctctt 806
>BF01043B1E03
Length = 830
Score = 167 bits (84), Expect = 8e-41
Identities = 194/230 (84%), Gaps = 3/230 (1%)
Strand = Plus / Plus
Query: 1126 tgggagcgagaggtgtaacggctaaatctctctacaacctactaaaagacttgggcctgt 1185
|||||| | ||||| |||| ||| |||||||||||||||||| ||| ||||| |||||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 1186 gcagaactcacatcaattcattcttggaacggacttcgaaggcagtcctagtaggttctt 1245
||||||| ||||||| |||||||||||||| ||| | ||||||| ||||| ||| |
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcctag---gtttgt 320
Query: 1246 ttcaaatttggttaggtagggagaggagcttggacattggagttgagcgtttaacgcgcg 1305
||||||||||||||||||| ||||||| |||||||| ||||| ||||| ||||||||||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcg 380
Query: 1306 ttagttaaaggccccttaaacctacacttgggtcgcaagtcccaggcact 1355
|||| || ||||| ||||||||| || ||||| |||||||||| |||||
Sbjct: 381 ttagataggggccctttaaacctatacctgggttgcaagtcccaagcact 430
>BF01047B2H03
Length = 758
Score = 167 bits (84), Expect = 8e-41
Identities = 212/252 (84%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 736 tcatacgtgaagcggttagtctttcggtagccagagtgcaaagggaaataaccacaaacg 795
|||||| ||||||||||||| ||| ||||| || | | ||| ||||||||||||||||
Sbjct: 251 tcatacatgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacg 192
Query: 796 agcgatcagtaggttttgtgagagaggacactaggactataaaatcaaacgtcaagcctt 855
||||| | | |||||||||||||| |||| |||| ||||||| |||||| |||||||||
Sbjct: 191 ggcgattaattggttttgtgagagaagacattagggctataaagtcaaacatcaagcctt 132
Query: 856 actccattcttaaagcgacttcgaattggattataatgatggatacgtataagaagcaat 915
|||| || ||||||||| |||| |||| | |||||| |||||||||||| | | | ||
Sbjct: 131 actctatccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgat 72
Query: 916 ataaaatcccagaggatatttgtgtgtcggcctccagacccgacatatttt-tatattcg 974
| |||||||| ||| ||| ||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 71 acaaaatccccgagcata-ttgtgtgtcggtttccagaccagacatattttatatattcg 13
Query: 975 cgaattttaaag 986
||||||||||||
Sbjct: 12 cgaattttaaag 1
Score = 123 bits (62), Expect = 1e-27
Identities = 122/142 (85%)
Strand = Plus / Minus
Query: 577 tgagtccaaaaaggccttcggagctctataaacacctgagagtttccaagagatatatcc 636
|||||| ||||||||| |||||||||||||||||| | ||||||||||||||| ||||||
Sbjct: 756 tgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatatcc 697
Query: 637 tggggaaatcccatgatgacgtcgttacatcgttctcaaaagacaaagatgctccagagc 696
||||||| ||||| |||| ||| ||||||| |||||||| | | |||||| || || |
Sbjct: 696 cggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctgaac 637
Query: 697 tagagtcaaggcttcaattcca 718
|| ||||||| |||||||||||
Sbjct: 636 taaagtcaagacttcaattcca 615
>BF14_335_C4
Length = 1491
Score = 167 bits (84), Expect = 8e-41
Identities = 182/212 (85%), Gaps = 7/212 (3%)
Strand = Plus / Plus
Query: 1224 aaggcagtcctagtaggttcttttcaaatttggttaggtagggagaggagcttggacatt 1283
||||||| ||||| ||| || |||| |||||||||||||| |||||||||||||| | |
Sbjct: 1155 aaggcagccctagcaggatcgattcatatttggttaggtagagagaggagcttggaaagt 1214
Query: 1284 ggagttgagcgtttaacgcgcgttagttaaaggccccttaaacctacacttgggtcgcaa 1343
||| ||||||||||| |||||| || |||||||||||||||||||||| ||||||||||
Sbjct: 1215 tgaggtgagcgtttaatgcgcgtaagataaaggccccttaaacctacacctgggtcgcaa 1274
Query: 1344 gtcccaggcactgt-----gtcctctccctgaaacgcgatggacccggcaccccgcacgg 1398
|||||||||||||| |||||| |||| |||||||||| ||| ||| ||||||||
Sbjct: 1275 gtcccaggcactgttgaagctcctct-cctgcaacgcgatggtccccgca-accgcacgg 1332
Query: 1399 tgaatccattgaatgctaagagatttcgtctc 1430
||||||||| ||||||| |||| |||||||||
Sbjct: 1333 tgaatccatggaatgctgagagttttcgtctc 1364
>BF01060B1D11
Length = 799
Score = 141 bits (71), Expect = 4e-33
Identities = 150/175 (85%), Gaps = 1/175 (0%)
Strand = Plus / Minus
Query: 493 tcataaagatgttgaagttgtggctcgggctcgcgctaacggctgattcatcggatttat 552
|||||||| ||||||| ||||||||| |||||||| | || ||||| | |||| ||||
Sbjct: 668 tcataaag-tgttgaatttgtggctccggctcgcgacatcgactgatacgtcggctttaa 610
Query: 553 tcaggaatcgcaaaagttttggggtgagtccaaaaaggccttcggagctctataaacacc 612
| ||| ||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 609 ttagggatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacact 550
Query: 613 tgagagtttccaagagatatatcctggggaaatcccatgatgacgtcgttacatc 667
| ||||||||||||||| |||||| ||||||| ||||| |||| ||| |||||||
Sbjct: 549 taagagtttccaagagacatatcccggggaaagcccataatgatgtcattacatc 495
>BF01019A1H08
Length = 504
Score = 135 bits (68), Expect = 3e-31
Identities = 108/120 (90%), Gaps = 6/120 (5%)
Strand = Plus / Minus
Query: 1316 gccccttaaacctacacttgggtcgcaagtcccaggcactgtg-----tcctctccctga 1370
||||||||||||||||| |||||||||| ||||||||||||| |||||||||||
Sbjct: 482 gccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgc 423
Query: 1371 aacgcgatggacccggcaccccgcacggtgaatccattgaatgctaagagatttcgtctc 1430
||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||
Sbjct: 422 aacgcgatggacccggcaccc-gcacggtgaatccattgaatgctaagaggtttcatctc 364
>BF01016B1E06
Length = 606
Score = 101 bits (51), Expect = 4e-21
Identities = 100/114 (87%), Gaps = 3/114 (2%)
Strand = Plus / Minus
Query: 1244 ttttcaaatttggttaggtagggagaggagcttggacattggagttgagcgtttaacgcg 1303
||||||||||||||||||||| |||||||| |||||| ||||| |||||||||||||||
Sbjct: 324 ttttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg 265
Query: 1304 cgttagttaaaggccccttaaacctacacttgggtcgcaagtcccaggcactgt 1357
|||| || |||||||||||||||||| |||||||| | |||| ||||||||
Sbjct: 264 --ttagatag-ggccccttaaacctacacctgggtcgctactccccggcactgt 214
>BF01031B2E06
Length = 707
Score = 93.7 bits (47), Expect = 9e-19
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 1092 aataggttcgtcgtggatttatacgtggtagaagtgggagcgagaggtgtaacggctaaa 1151
||||||||||| | |||| |||| |||||||||||||||||| | ||||| ||||||
Sbjct: 497 aataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaa 556
Query: 1152 tctctctacaacctactaaaagacttgggcctgtgcagaactcacatcaattcattcttg 1211
|||||| |||||||||||||| ||||||||||| |||| || ||||||| | || ||
Sbjct: 557 tctctccacaacctactaaaaaccttgggcctgtccagatctaacatcaaataatcttta 616
Query: 1212 gaacggacttcgaaggcag 1230
|||| |||||||||||||
Sbjct: 617 gaacatacttcgaaggcag 635
>BF01017A1F03
Length = 782
Score = 89.7 bits (45), Expect = 1e-17
Identities = 145/175 (82%), Gaps = 5/175 (2%)
Strand = Plus / Plus
Query: 1172 agacttgggcctgtgcagaactcacatcaattcattcttggaacggacttcgaag--gca 1229
||||||| ||| || || |||| |||||||||||||||||||||| ||||| ||| |||
Sbjct: 116 agacttgagccagtccaaaactaacatcaattcattcttggaacgtacttccaaggcgca 175
Query: 1230 gtcctagtaggttcttttcaaatttggttaggtagggagaggagcttggacattggagtt 1289
| ||||||| || |||| || |||||||| ||| ||||||||||| || ||||| |
Sbjct: 176 gccctagtacattagtttctaagttggttagatagagagaggagcttccacggtggaggt 235
Query: 1290 gagcgtttaacgcgcgttagttaaaggccccttaaacctacacttgggtcgcaag 1344
||||||||||||||| |||| | ||| ||| ||||||||||| |||||||||||
Sbjct: 236 gagcgtttaacgcgcattag--ataggtccc-taaacctacacctgggtcgcaag 287
>BF14_335_C5
Length = 1597
Score = 87.7 bits (44), Expect = 6e-17
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 1259 aggtagggagaggagcttggacattggagttgagcgtttaacgcgcgttagttaaaggcc 1318
|||||| ||||||||||||||| ||||| ||||||||||| ||||||||| | |||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 1319 ccttaaacctacacttgggtcgcaagtcccaggcactgt 1357
|||||||||||||| ||||||||||||||||||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgt 1536
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 4e-15
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 1257 ttaggtagggagaggagcttggacattggagttgagcgtttaacgcgcgttagttaaagg 1316
|||||||| ||||||||||||||| | ||| || | |||||||| | ||||| || ||
Sbjct: 708 ttaggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatag-gg 650
Query: 1317 ccccttaaacctacacttgggtcgcaagtcccaggcactgt 1357
||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 649 ccccttacacctacacctgggtcgcaagtcccaggcactgt 609
>BF01021A2B11
Length = 729
Score = 73.8 bits (37), Expect = 9e-13
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 1247 tcaaatttggttaggtagggagaggagcttggacattggagttgagcgtttaacgcgcgt 1306
||||||||||||||| || |||||||||||||| ||||| ||||||||||||||| ||
Sbjct: 357 tcaaatttggttaggaag--agaggagcttggacggtggaggtgagcgtttaacgcgtgt 414
Query: 1307 tagttaaaggccccttaaacctacacttgggtcgcaagtcccaggcac 1354
||| | ||| |||| ||||||||| ||||| | ||||||||||||
Sbjct: 415 tagatcggggcgccttcaacctacacctgggtgcccagtcccaggcac 462
>BF01048A1E04
Length = 789
Score = 73.8 bits (37), Expect = 9e-13
Identities = 56/61 (91%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 1371 aacgcgatggacccggcaccccgcacggtgaatccattgaatgctaagagatttcgtctc 1430
||||||||||||||||||||| ||||||||||||||| ||| | |||||| |||||||||
Sbjct: 1 aacgcgatggacccggcaccc-gcacggtgaatccatggaaagataagaggtttcgtctc 59
Query: 1431 t 1431
|
Sbjct: 60 t 60
>BF01014B2F02
Length = 623
Score = 67.9 bits (34), Expect = 5e-11
Identities = 65/73 (89%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 1359 tcctctccctgaaacgcgatggacccggcaccccgcacggtgaatccattgaatgctaag 1418
||||||||||| ||||| |||||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 587 tcctctccctgcaacgc--tggacccggcaccc-gcacggtgcatccactgaatgctgag 531
Query: 1419 agatttcgtctct 1431
|| ||||||||||
Sbjct: 530 aggtttcgtctct 518
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 221,718
Number of extensions: 4629
Number of successful extensions: 4629
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 4613
Number of HSP's successfully gapped: 18
Length of query: 1813
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1796
Effective length of database: 8,119,229
Effective search space: 14582135284
Effective search space used: 14582135284
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)