BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13386 (UTR included)
(1432 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1302_C1 1818 0.0
>BF14_1302_C1
Length = 1824
Score = 1818 bits (917), Expect = 0.0
Identities = 932/937 (99%)
Strand = Plus / Plus
Query: 496 gtacaatgaataatgccatctgtcaaggactgcggtcaccagttcggaggctcgctggtc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gtacaatgaataatgccatctgtcaaggactgcggtcaccagttcggaggctcgctggtc 590
Query: 556 taagaaataaacttatatcaacatctgttgtccacaatgagaccattctagtcaagaatt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 taagaaataaacttatatcaacatctgttgtccacaatgagaccattctagtcaagaatt 650
Query: 616 acgatgatttcgtaaataaggtgatgaataacgagaaacctgtgatagtgaacttccacg 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acgatgatttcgtaaataaggtgatgaataacgagaaacctgtgatagtgaacttccacg 710
Query: 676 cggagtggtgtgagccgtgcaagatcctcacgccgaagctcaaggagttggttgaaccgt 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cggagtggtgtgagccgtgcaagatcctcacgccgaagctcaaggagttggttgaaccgt 770
Query: 736 tcacttcgctggatctcgccatagtcgacgtggaagacaacgcggagctagttcacactt 795
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 771 tcacttcgctggatctcgccatagtcgacgtggaagacaacgcggagctagttcacacct 830
Query: 796 ttgaggtgaaagcggtaccggcggttatagccatcaggaatagtctcatagtggacaaat 855
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 831 ttgaggtgaaagcggtaccggcggttatagccatcaggaatggtctcatagtggacaaat 890
Query: 856 tcatcggccttgtggacacggacatgatcaacagtctcatagaacggatggcggggaaac 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 tcatcggccttgtggacacggacatgatcaacagtctcatagaacggatggcggggaaac 950
Query: 916 ggaataatggcgcgtaaaaatgacattgataaatgatatgtaactctaatataatctgtg 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 ggaataatggcgcgtaaaaatgacattgataaatgatatgtaactctaatataatctgtg 1010
Query: 976 ctctgatcccgcttctgtcgctgttagatataattatgttgaaatatttatgagccgtca 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 ctctgatcccgcttctgtcgctgttagatataattatgttgaaatatttatgagccgtca 1070
Query: 1036 aatagatacgtaaataagggcacaattgacaggtctagtttgtgacaatataaaaaatat 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 aatagatacgtaaataagggcacaattgacaggtctagtttgtgacaatataaaaaatat 1130
Query: 1096 atgaataatatacagtacgctacgcacgatgatttgtaaaacttcaataaagtgtagcac 1155
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1131 atgaataatatacagtacgctacgtacgatgatttgtaaaacttcaataaagtgtagcac 1190
Query: 1156 aatctgtatatattttgttagtttttttaactatgaagtatttttataaagaaaaattgt 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 aatctgtatatattttgttagtttttttaactatgaagtatttttataaagaaaaattgt 1250
Query: 1216 gacattgtttctttgaagttattttgatatattttcaaaaaggccgcaattgctcatata 1275
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 1251 gacattgtttctttgaagttattttgatatattttcgaaaaagccgcaattgctcatata 1310
Query: 1276 ctttaattgttataagaactagatatgtttaataaatattttgttttattgtttacctca 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 ctttaattgttataagaactagatatgtttaataaatattttgttttattgtttacctca 1370
Query: 1336 cgtttatttactatttaatggtaagtaaatttaaaatatgctattagtttaaaatgttct 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 cgtttatttactatttaatggtaagtaaatttaaaatatgctattagtttaaaatgttct 1430
Query: 1396 aaacggttaaaggtgccatatactgattctgaatgga 1432
|||||||||||||||||||||||||||||||||||||
Sbjct: 1431 aaacggttaaaggtgccatatactgattctgaatgga 1467
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,000
Number of extensions: 4423
Number of successful extensions: 4423
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4423
Number of HSP's successfully gapped: 1
Length of query: 1432
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1415
Effective length of database: 8,119,229
Effective search space: 11488709035
Effective search space used: 11488709035
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)