BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13389 (UTR included)
(1438 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_957_C1 1505 0.0
>BF14_957_C1
Length = 811
Score = 1505 bits (759), Expect = 0.0
Identities = 799/811 (98%), Gaps = 1/811 (0%)
Strand = Plus / Plus
Query: 473 gagaggacgtgcaggaaacgaaataattatgttgttcatactcgccatagctctaacgct 532
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||
Sbjct: 1 gagaggacgtgcaggaaacgaaataataatgttgttcatactccccatagctctaacact 60
Query: 533 tgccagtgcccaggctaaattctacaccgactgtgggtctaagctggcgactgttaaaaa 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgccagtgcccaggctaaattctacaccgactgtgggtctaagctggcgactgttaaaaa 120
Query: 593 tgtcggcgtgagcggatgtgccgaggatgccaaggaatgcgtgctgagaaggaataccaa 652
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcggggtgagcggatgtgccgaggatgccaaggaatgcgtgctgagaaggaataccaa 180
Query: 653 cgctacaattagtgtggacttcgtaccatccaccgacgtcgaatctctcgagacggttgt 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgctacaattagtgtggacttcgtaccatccaccgacgtcgaatctctcgagacggttgt 240
Query: 713 acatggtatcataatgaacctgccagttcctttcccgatgccacaaccggatgcctgcaa 772
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 acacggtatcataatgaacctgccagttcctttccccatgccacaaccggatgcctgcaa 300
Query: 773 ggattcaggcctcaactgtcccttgaaggccggcgaagaagcgttttacaaaacgacaat 832
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 ggattcaggcctcaactgtcccttaaaggccggcgaagaagcgttttacaaaacgacaat 360
Query: 833 gccagttttgaaatcgtatcccagagtaaaagtggaagttaaatgggaacttaaaaacga 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccagttttgaaatcgtatcccagagtaaaagtggaagttaaatgggaacttaaaaacga 420
Query: 893 ttctggagactacgtttgtatcatgataccagcaaaaattaactaaattttgacatttaa 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttctggagactacgtttgtatcatgataccagcaaaaattaactaaattttgacatttaa 480
Query: 953 accaaaccaaagacaataaagctgtctatgaaaataaccttaagaaaattaaaaaagttc 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accaaaccaaagacaataaagctgtctatgaaaataaccttaagaaaattaaaaaagttc 540
Query: 1013 cgataactgtaatgattgtaatgtgtattataagtattattaaaaatagaagcgactcta 1072
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 541 cgataactgtaatgattgtaatgtgtattataagtattatt-aaaatagaagcgactcta 599
Query: 1073 tctttatctttgtctgtctatagaaatcgctagattacaaataacgtacaaatataaaaa 1132
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 600 tctttatctttgtctgtctatagaaatcgctaggttacaaataacgtacaaatataaaaa 659
Query: 1133 tcttaatttctgactttattatacataagttttaacacagttttatttaagcacaagttt 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcttaatttctgactttattatacataagttttaacacagttttatttaagcacaagttt 719
Query: 1193 atataaatctaggactgttatagttataatattattgaaaaaaattgtccaaatacattt 1252
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 720 atatatatctaggactgttatagttataatattattaaaaaaaattgtccaaatacattt 779
Query: 1253 tcaccatagatacatttatatacattttttt 1283
| |||||||||||||||||||||||||||||
Sbjct: 780 taaccatagatacatttatatacattttttt 810
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,344
Number of extensions: 5734
Number of successful extensions: 5734
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5732
Number of HSP's successfully gapped: 1
Length of query: 1438
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1421
Effective length of database: 8,119,229
Effective search space: 11537424409
Effective search space used: 11537424409
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)