BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13411 (UTR included)
(2506 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_207_C1 1717 0.0
>BF14_207_C1
Length = 1054
Score = 1717 bits (866), Expect = 0.0
Identities = 940/969 (97%), Gaps = 18/969 (1%)
Strand = Plus / Plus
Query: 567 gtggaaatgggtatgaagaatcacgaactggttccaggctctttagtggcttctatagcc 626
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 104 gtggaaatgggtatgaagaatcacgaactggttccaggctccttagtggcttctatagcc 163
Query: 627 aatttgcgacacggcggagtgcacaaactgatgaaagatctttgtaaacatagattgttg 686
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 164 aatttgcgacacggcggagtccacaaactgatgaaagatctttgtaaacatagattgttg 223
Query: 687 acatacgaacgtggtaaacactatgatggctaccgtcttacaaatgctggttatgattac 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 acatacgaacgtggtaaacactatgatggctaccgtcttacaaatgctggttatgattac 283
Query: 747 ttagctcttaaagctttaacaaacagaaaggttattgcctcttttggtaaccaaattggt 806
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttggctcttaaagctttaacaaacagaaaggttattgcctcttttggtaaccaaattggt 343
Query: 807 gttggaaaggaatctaacatttacaccgtagctgatgaagacagaaacccgctatgtttg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gttggaaaggaatctaacatttacaccgtagctgatgaagacagaaacccgctatgtttg 403
Query: 867 aaacttcataggcaatcatatataaacaggctgggcagaacatgcttccggaacatcaaa 926
||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 404 aaacttcataggc------------------tgggcagaacatgcttccggaacatcaaa 445
Query: 927 gacaagagagactatcatgcacaccgtaaccgggcctcatggctgtatctctcccgcata 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gacaagagagactatcatgcacaccgtaaccgggcctcatggctgtatctctcccgcata 505
Query: 987 tcagctaccaaggaatttgcatacatgaaggctttatatgaccgtggcttcccagtacca 1046
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 506 tcagctaccaaggaatttgcatacatgaaggctttatatgaccgtgacttcccagtacca 565
Query: 1047 aaacccattgattttaacagacactgtgttgtcatgcagctggttggagggggaccttta 1106
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 566 aaacccatagattttaacagacactgtgttgtcatgcaactggttggagggggaccttta 625
Query: 1107 acccatgtgtcggcagtagatgatgtggaagcactttatgacgagttaatgaaccttata 1166
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 626 acccatgtgtcggcagtagatgatgtagaagcactttatgacgagttaatgaaccttata 685
Query: 1167 gtgagactcggcaactgtggtgtcattcatggtgacttcaacgagttcaacatcatgata 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gtgagactcggcaactgtggtgtcattcatggtgacttcaacgagttcaacatcatgata 745
Query: 1227 gatgaagaaggacaccccatcatcatagacttccctcagatgatctccacaatgcatccc 1286
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 746 gatgaagaaggacaccccatcatcatagacttccctcagatgatttccacaatgcatccc 805
Query: 1287 aatgcggaactatactttgaccgagatgttcaatgtgtccgagcgttctttaagaagagg 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aatgcggaactatactttgaccgagatgttcaatgtgtccgagcgttctttaagaagagg 865
Query: 1347 tttggatatgaatccagtctgtacccaaagttctctgaactggagcgagatgaagacttg 1406
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 866 tttggatatgaatccagtctgtatccaaagttctctgaactggagcgagatgaagacttg 925
Query: 1407 gatcgagaggtggcttgttcagggtaccggaaggaacatgatcaccagctgctacaggaa 1466
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 926 gatcgagaggtggcttgttcagggtaccggaaggaacatgatcaccagctgttacaggaa 985
Query: 1467 atgggaatagaattgcaattgagtggagacgaaggcagcgagacagaaaaccttgctgaa 1526
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 986 atgggaatagaattgcaattgagtggagacgaaggcagcgagacagaaaactttgctgaa 1045
Query: 1527 cctgatgca 1535
|||||||||
Sbjct: 1046 cctgatgca 1054
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,215
Number of extensions: 6254
Number of successful extensions: 6254
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6254
Number of HSP's successfully gapped: 2
Length of query: 2506
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2489
Effective length of database: 8,119,229
Effective search space: 20208760981
Effective search space used: 20208760981
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)