BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13424 (UTR included)
(2395 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B2H03 70 2e-11
BF01047B2B04 70 2e-11
BF14_729_C2 70 2e-11
BF14_729_C3 68 7e-11
>BF01049B2H03
Length = 832
Score = 69.9 bits (35), Expect = 2e-11
Identities = 96/114 (84%), Gaps = 3/114 (2%)
Strand = Plus / Minus
Query: 1950 gcgagtattcatttaaacgaaactaatgttttacggattgtactacgcgta-tttaatat 2008
||||||||||||||||| ||||||||| |||| ||||| ||||| ||||| |||| ||
Sbjct: 334 gcgagtattcatttaaatgaaactaatatttttcggat--tactaagcgtattttattac 277
Query: 2009 ctcgtctgcccgtgatcacggtcgctgcgaagtgatcgaaacgtcgggagtatg 2062
||||||||| | |||||||| |||||||||| | |||||||| || ||||||
Sbjct: 276 accgtctgcccctaatcacggttgctgcgaagtaaccgaaacgtaggtagtatg 223
>BF01047B2B04
Length = 762
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 2007 atctcgtctgcccgtgatcacggtcgctgcgaagtgatcgaaacgtcgggagtat 2061
|||||| ||| ||||||||||||| |||||||||| | |||||||||||||||||
Sbjct: 220 atctcgcctgaccgtgatcacggttgctgcgaagtaaacgaaacgtcgggagtat 166
>BF14_729_C2
Length = 1289
Score = 69.9 bits (35), Expect = 2e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2008 tctcgtctgcccgtgatcacggtcgctgcgaagtgatcgaaacgtcgggagtatg 2062
||||||||||||||||||||||| |||| |||| | ||||||||||||||||||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatg 582
>BF14_729_C3
Length = 2041
Score = 67.9 bits (34), Expect = 7e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 2009 ctcgtctgcccgtgatcacggtcgctgcgaagtgatcgaaacgtcgggagtatg 2062
|||||||||||||||||||||| ||||| |||| | ||||||||||||| ||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatg 1642
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 378,477
Number of extensions: 34271
Number of successful extensions: 34271
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 34271
Number of HSP's successfully gapped: 4
Length of query: 2395
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2378
Effective length of database: 8,119,229
Effective search space: 19307526562
Effective search space used: 19307526562
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)