BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13435 (UTR included)
(4909 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_898_C1 1187 0.0
BF01023B2C08 886 0.0
>BF14_898_C1
Length = 1113
Score = 1187 bits (599), Expect = 0.0
Identities = 614/619 (99%)
Strand = Plus / Plus
Query: 2543 ctgctaccagctgttcaatgatttatgcggtttggggcgccacagggaggtttatcacag 2602
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 13 ctgctaccagctgttcaatgacttatgcggtttggggcgccacagggagctttatcacag 72
Query: 2603 agatagcgcattggaatgcaaggtgtgcaggaacggcttcaccagcgacagatcgctggc 2662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 agatagcgcattggaatgcaaggtgtgcaggaacggcttcaccagcgacagatcgctggc 132
Query: 2663 ggctcacatgtactcgcacacattatttaactgctcgtcctgcaacagagcgttcgagaa 2722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ggctcacatgtactcgcacacattatttaactgctcgtcctgcaacagagcgttcgagaa 192
Query: 2723 tcgcaagtgctatatttaccataaaagcgaatgcaccggaaggaagtcctacacccagaa 2782
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 193 tcgcaagtgctatatttaccataaaagcgaatgcaccggaaggaagtcctacacgcagaa 252
Query: 2783 cctttatgaatgtcatgattgtggtagcaaatacaccaagaaaccctcgctgaggataca 2842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cctttatgaatgtcatgattgtggtagcaaatacaccaagaaaccctcgctgaggataca 312
Query: 2843 tatagtgcagaaacatttgaatgtcctgccgtttgtctgccagacttgcgggaagaggtg 2902
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tatagtgcagaaacatctgaatgtcctgccgtttgtctgccagacttgcgggaagaggtg 372
Query: 2903 ttccactaggaaccacttgaggtctcatgagctggttcacaagaccgagagacaggtcta 2962
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 373 ttccactaggaaccacttgaggtctcatgagctggttcacaaaaccgagagacaggtcta 432
Query: 2963 cgagtgttactgcggtgcaaaaatgcgatcggctctcggctttgagatgcaccagaggat 3022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cgagtgttactgcggtgcaaaaatgcgatcggctctcggctttgagatgcaccagaggat 492
Query: 3023 tcattcgggggagaagcgatatgtttgcgaggagtgtggagacaggttcctctcggcctc 3082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcattcgggggagaagcgatatgtttgcgaggagtgtggagacaggttcctctcggcctc 552
Query: 3083 gaggaggttggaccacgtcaagaggaagcacagatctaaagagttagcccacggctgcga 3142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gaggaggttggaccacgtcaagaggaagcacagatctaaagagttagcccacggctgcga 612
Query: 3143 caaatgcgatgcaagattc 3161
|||||||||||||||||||
Sbjct: 613 caaatgcgatgcaagattc 631
Score = 688 bits (347), Expect = 0.0
Identities = 379/390 (97%), Gaps = 1/390 (0%)
Strand = Plus / Plus
Query: 3162 ctgagggaggagctttatgtacccaagggtatctgcattgggtgctccagtgtggcgatc 3221
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 724 ctgagggaggagctttacgtacccaagggtatctgcatcgggtgctccagtgtggcgatc 783
Query: 3222 tcggccttcgagttccggatattcaccaggaactcggtcagtctgtggaggaactgcatc 3281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tcggccttcgagttccggatattcaccaggaactcggtcagtctgtggaggaactgcatc 843
Query: 3282 aacaccatagacacgttgccgaaaatgtcatgcaataagtccgtatacgccatcctgagg 3341
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 844 aacaccatagacacgctgccgaagatgtcatgcaataagtccgtatacgccatcctgagg 903
Query: 3342 ggaaatatgtcgctgcaggcggtgaacagcttcaacggcgggaagacggagctggtggaa 3401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ggaaatatgtcgctgcaggcggtgaacagcttcaacggcgggaagacggagctggtggaa 963
Query: 3402 catctctcgaaccgtctgaccaagaagaaacctttagtagtggagaagaagccgagacat 3461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 964 catctctcgaaccgtctgaccaagaagaaacctttagtagtggagaagaagccgagannt 1023
Query: 3462 cccagaacggggccggcctgcacttgtgtcgactgcggaaaggcgttcctaagt-ccgta 3520
|||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1024 cccannncggggccggcctgcacttgtgtcgactgcggaaaggcgttcctaagtccctta 1083
Query: 3521 ctacttgaatctacatttgcgcaacagcgg 3550
||||||||||||||||||||||||||||||
Sbjct: 1084 ctacttgaatctacatttgcgcaacagcgg 1113
>BF01023B2C08
Length = 817
Score = 886 bits (447), Expect = 0.0
Identities = 476/488 (97%)
Strand = Plus / Plus
Query: 3162 ctgagggaggagctttatgtacccaagggtatctgcattgggtgctccagtgtggcgatc 3221
||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 330 ctgagggaggagctttacgtacccaagggtatctgcatcgggtgctccagcgtggcgatc 389
Query: 3222 tcggccttcgagttccggatattcaccaggaactcggtcagtctgtggaggaactgcatc 3281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcggccttcgagttccggatattcaccaggaactcggtcagtctgtggaggaactgcatc 449
Query: 3282 aacaccatagacacgttgccgaaaatgtcatgcaataagtccgtatacgccatcctgagg 3341
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aacaccatagacacgctgccgaaaatgtcatgcaataagtccgtatacgccatcctgagg 509
Query: 3342 ggaaatatgtcgctgcaggcggtgaacagcttcaacggcgggaagacggagctggtggaa 3401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggaaatatgtcgctgcaggcggtgaacagcttcaacggcgggaagacggagctggtggaa 569
Query: 3402 catctctcgaaccgtctgaccaagaagaaacctttagtagtggagaagaagccgagacat 3461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 catctctcgaaccgtctgaccaagaagaaacctttagtagtggagaagaagccgagacat 629
Query: 3462 cccagaacggggccggcctgcacttgtgtcgactgcggaaaggcgttcctaagtccgtac 3521
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 630 cccagaacggggccggcctgcacttgtgtcgactgcggaaaggcgttcctaagtccttac 689
Query: 3522 tacttgaatctacatttgcgcaacagcggacagaaggaggcctgctggctgtgcggggcc 3581
||||||||||||||||||||| |||||||||| | |||||||||||||||||||||
Sbjct: 690 tacttgaatctacatttgcgcnnnagcggacagannnangcctgctggctgtgcggggcc 749
Query: 3582 atggtggtcaggggcagagagatgaaggaacatttgtcaacaatacacaagactgatatg 3641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 atggtggtcaggggcagagagatgaaggaacatttgtcaacaatacacaagactgatatg 809
Query: 3642 attctatg 3649
||||||||
Sbjct: 810 attctatg 817
Score = 581 bits (293), Expect = e-165
Identities = 302/305 (99%)
Strand = Plus / Plus
Query: 382 atgacgtttgacacacttctgttttttatattttagctattaatttgcaagaagcaactg 441
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 25 atgacgtttgacacacttctgttttttatattttagctattaatttgcaagaggcaacta 84
Query: 442 cataaaagaagccggaaacacgctaaacctctgagaaatattattatagcgccatcgtaa 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cataaaagaagccggaaacacgctaaacctctgagaaatattattatagcgccatcgtaa 144
Query: 502 tgagcaaacaagtggatgtcaaggcgttagtgtcacacgtagtccgcggcgacggtgtgc 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tgagcaaacaagtggatgtcaaggcgttagtgtcacacgtagtccgcggcgacggtgtgc 204
Query: 562 aaagatgtagaatatgtatgggagatacatccgaagggcaagttcatttagaagatacgg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aaagatgtagaatatgtatgggagatacatccgaagggcaagttcatttagaagatacgg 264
Query: 622 tgatgatggacggagataaacccatcacattatcagaattactagaaacagtcaccggag 681
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatgatggatggagataaacccatcacattatcagaattactagaaacagtcaccggag 324
Query: 682 ttcag 686
|||||
Sbjct: 325 ttcag 329
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 455,991
Number of extensions: 7650
Number of successful extensions: 7650
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7649
Number of HSP's successfully gapped: 4
Length of query: 4909
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4891
Effective length of database: 8,109,745
Effective search space: 39664762795
Effective search space used: 39664762795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)