BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13472 (UTR included)
(1564 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3109_C1 1643 0.0
>BF14_3109_C1
Length = 928
Score = 1643 bits (829), Expect = 0.0
Identities = 863/872 (98%), Gaps = 3/872 (0%)
Strand = Plus / Plus
Query: 546 gttgttatggggggtttgttaaatcgtatgtggtggggaggagacccggatggtgtgaac 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 gttgttatggggggtttgttaaatcgtatgtggtggggaggagacccggatggtgtgaac 84
Query: 606 ccagtatctggattatctcgtagagatgtgttcgctgtgcagaagtcctgggcgattgtt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccagtatctggattatctcgtagagatgtgttcgctgtgcagaagtcctgggcgattgtt 144
Query: 666 tatgccaatccactcgcaaatggcagcgagctattgaaaagatatttccgagcacatcct 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tatgccaatccactcgcaaatggcagcgagctattgaaaagatatttccgagcacatcct 204
Query: 726 gaaagcaaagaattcttcagaatgctccgcaaattaaacgaaaatgaatttgatgataat 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaaagcaaagaattcttcagaatgctccgcaaattaaacgaaaatgaatttgatgataat 264
Query: 786 caccagttcaaggcgcatgttatgagtctgatgagctccttgaatctagccataaccaac 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caccagttcaaggcgcatgttatgagtctgatgagctccttgaatctagccataaccaac 324
Query: 846 ttggaccagccggagatagtggtggccatgatgaataagctcggcgaatcacacggcagg 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttggaccagccggagatagtggtggccatgatgaataagctcggcgaatcacacggcagg 384
Query: 906 agaaaaattgacgagcaaaacttccataatctcaaaggaatcatcgttaaaatgttcatc 965
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 agaaaaattgacgagcaaaacttccatgatctcaaaggaatcatcgttaaaatgttcatc 444
Query: 966 gacgtcttaaaactcgacgacaagaacctcgcctcctggggtaaagcggtagacttcctc 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gacgtcttaaaactcgacgacaagaacctcgcctcctggggtaaagcggtagacttcctc 504
Query: 1026 tacaaacacatcttcgtaactttaaaaccagaatcctgagagatgttaaggctgtttgta 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tacaaacacatcttcgtaactttaaaaccagaatcctgagagatgttaaggctgtttgta 564
Query: 1086 tttagtcaatatttaatgtaccaaaaaaaaaatactcttaacaatatttctttgtaacaa 1145
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttagtcaatatttaatgtacc-aaaaaaaaatactcttaacaatatttctttgtaacaa 623
Query: 1146 taatgtatatattctatttatatatacatataaatttgttaatatacatttatatgtatt 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taatgtatatattctatttatatatacatataaatttgttaatatacatttatatgtatt 683
Query: 1206 tgtatatttttaaaattttatacaaaaatttttacacgcttataagatgacgagatgtta 1265
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 684 tgtatatttttaaaattttatacaaaaaatgttacacgcttataagatgacgagatgtta 743
Query: 1266 agtagaataagaataatgagttatgaaattacattgaattatattacaagtgttcatata 1325
|||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 744 agtagaattagaataatgagttatgaaattacattgaattatattacacgtattcatata 803
Query: 1326 aaatcattgtaattatcataacaatttcagaatttattatatgtttggtttgagtgacaa 1385
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 804 aaatcattgtaattatcataacaatttcagaatttat--tatgtttggtttgagtgacaa 861
Query: 1386 tacaatagctattattttgcttcccaattatt 1417
||||||||||||||||||||||||||||||||
Sbjct: 862 tacaatagctattattttgcttcccaattatt 893
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 305,700
Number of extensions: 7629
Number of successful extensions: 7629
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7627
Number of HSP's successfully gapped: 1
Length of query: 1564
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1547
Effective length of database: 8,119,229
Effective search space: 12560447263
Effective search space used: 12560447263
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)