BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN13474 (UTR included)
         (1504 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF14_335_C4                                                            76   2e-13
BF01019A1H08                                                           68   4e-11

>BF14_335_C4
          Length = 1491

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 75/86 (87%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1164 gagacgaaacttctcaccattccatggattcaccgtgcagttgccgggccctttgcgttg 1223
            |||||||||  ||||| ||||||||||||||||||||| ||||| ||| || | ||||||
Sbjct: 1364 gagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttg 1305

                                      
Query: 1224 taaagagaggagcttcaacagtgcct 1249
              | ||||||||||||||||||||||
Sbjct: 1304 -caggagaggagcttcaacagtgcct 1280


>BF01019A1H08
          Length = 504

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1164 gagacgaaacttctcaccattccatggattcaccgtgcagttgccgggccctttgcgttg 1223
            |||| ||||| ||| | ||||| ||||||||||||||| | ||||||| || | ||||||
Sbjct: 364  gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423

                                      
Query: 1224 taaagagaggagcttcaacagtgcct 1249
             |  ||||||||||||||||||||||
Sbjct: 424  cagggagaggagcttcaacagtgcct 449


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,404
Number of extensions: 6161
Number of successful extensions: 6161
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6160
Number of HSP's successfully gapped: 2
Length of query: 1504
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1487
Effective length of database: 8,119,229
Effective search space: 12073293523
Effective search space used: 12073293523
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)