BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13476 (UTR included)
(2314 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01007X1F02 1338 0.0
>BF01007X1F02
Length = 675
Score = 1338 bits (675), Expect = 0.0
Identities = 675/675 (100%)
Strand = Plus / Plus
Query: 1239 ctccatctctctctcgactacgccctcataagcatcttctatctccttctagcattcaca 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctccatctctctctcgactacgccctcataagcatcttctatctccttctagcattcaca 60
Query: 1299 ggagcattcgcttttgccaatctaaacgacctgtacactctaaacttcgtgccaacagat 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggagcattcgcttttgccaatctaaacgacctgtacactctaaacttcgtgccaacagat 120
Query: 1359 aacgagaacatattccttgaaatcgtcgaatacttcctcgcccttttcccagttttcacg 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgagaacatattccttgaaatcgtcgaatacttcctcgcccttttcccagttttcacg 180
Query: 1419 ctctccaccagttttccaatcatcgcgatcacgctcaggaataacctgcaaagcttattc 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctctccaccagttttccaatcatcgcgatcacgctcaggaataacctgcaaagcttattc 240
Query: 1479 ctggacaccagtagattagattcgtacaactttgtccttaggaagctggtgttcccggta 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggacaccagtagattagattcgtacaactttgtccttaggaagctggtgttcccggta 300
Query: 1539 gtggcggtggtaccaccgttgctactgacctacttcttagaagatataagtatactgata 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggcggtggtaccaccgttgctactgacctacttcttagaagatataagtatactgata 360
Query: 1599 aagttcaccggctcttacgccggcaccgggatacaatatttgatgccgacgttcctagtg 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagttcaccggctcttacgccggcaccgggatacaatatttgatgccgacgttcctagtg 420
Query: 1659 ctctcagccagaaggcattgcagcaatctgttaggtctaggcgtcgtcaataaatacaaa 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctctcagccagaaggcattgcagcaatctgttaggtctaggcgtcgtcaataaatacaaa 480
Query: 1719 agtcctttctcgaacgtagcgtgggcggcgttcgttctgatgtggtccttcatgtgcatt 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtcctttctcgaacgtagcgtgggcggcgttcgttctgatgtggtccttcatgtgcatt 540
Query: 1779 atattagtgtcagttaacatgttcgagagacgatgacaataaagtaggaatatatacact 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atattagtgtcagttaacatgttcgagagacgatgacaataaagtaggaatatatacact 600
Query: 1839 tcaacaattaaaagtatggataaataaaaactctgttcgtcgatactatatctaacaata 1898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaacaattaaaagtatggataaataaaaactctgttcgtcgatactatatctaacaata 660
Query: 1899 agctgttttttgctc 1913
|||||||||||||||
Sbjct: 661 agctgttttttgctc 675
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 341,794
Number of extensions: 9224
Number of successful extensions: 9224
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9224
Number of HSP's successfully gapped: 1
Length of query: 2314
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2297
Effective length of database: 8,119,229
Effective search space: 18649869013
Effective search space used: 18649869013
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)