BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13483 (UTR included)
(2089 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2A01 270 8e-72
BF01016A2H12 170 6e-42
>BF01042A2A01
Length = 771
Score = 270 bits (136), Expect = 8e-72
Identities = 332/393 (84%), Gaps = 17/393 (4%)
Strand = Plus / Minus
Query: 27 acgttaattctatgacgggcagaagtgccgaattgagtaacgtctttaaaaggcgttgta 86
|||||| ||||||||||| ||||||| | ||||| ||| ||| | ||| ||||||||||
Sbjct: 385 acgttagttctatgacggacagaagt-cagaattcagtgacggccgtaagaggcgttgta 327
Query: 87 ttgatgcatgctacgtacaagagaccaagtggaggggctcaaaatctaaaaacataggca 146
|| ||||||||| ||||||||| | || |||||||||||||| |||||||||||| |||
Sbjct: 326 ttaatgcatgctgcgtacaagatagtaaatggaggggctcaaattctaaaaacataagca 267
Query: 147 acggctacaaattaatttattatggcgaaaccaacaatagaaatggagtaggcctaataa 206
||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 266 acggctacaaattgattgattatggcgaaactaacaatagaaatggagtaggcgtaatac 207
Query: 207 tctcggaagactt------atctt---aaatgtcgatagggtaagcgatcgaataataat 257
||||||||||||| | || || | ||| |||||||||| |||| ||||||
Sbjct: 206 tctcggaagacttgtagggagattggcaagtttcgttagggtaagccatcg---aataat 150
Query: 258 aattaaaattgccctcgactatcaactaagtctaaatatcatctgggtttacgctccaca 317
| | |||||| |||||||| | |||| ||| || || ||||||| | |||||||||||||
Sbjct: 149 actcaaaattaccctcgacaaccaaccaagcctgaacatcatctcgatttacgctccaca 90
Query: 318 atcgagaagcgaagaatttaataaagacatattctgggacgtactttacaaattattttg 377
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 89 atcgggaagcgaagaatttaataaagatatattctgggacgtactttacaaattattatg 30
Query: 378 ttagagatacctattttgaagaaacggtgcatc 410
||||||||||| |||||||||||| ||||
Sbjct: 29 --agagataccta--ctgaagaaacggtacatc 1
>BF01016A2H12
Length = 747
Score = 170 bits (86), Expect = 6e-42
Identities = 131/146 (89%)
Strand = Plus / Minus
Query: 77 aggcgttgtattgatgcatgctacgtacaagagaccaagtggaggggctcaaaatctaaa 136
|||||||||||| ||||||||| ||||||||| | || ||||||| |||||| ||||||
Sbjct: 225 aggcgttgtattaatgcatgctgcgtacaagatagtaaatggagggactcaaattctaaa 166
Query: 137 aacataggcaacggctacaaattaatttattatggcgaaaccaacaatagaaatggagta 196
||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 165 gacataagcagcggctacaaattgatttattatggcgaaactaacaatagaaatggagta 106
Query: 197 ggcctaataatctcggaagacttatc 222
||| ||||| ||||||||||||||||
Sbjct: 105 ggcgtaatactctcggaagacttatc 80
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,745
Number of extensions: 4721
Number of successful extensions: 4721
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4719
Number of HSP's successfully gapped: 3
Length of query: 2089
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2072
Effective length of database: 8,119,229
Effective search space: 16823042488
Effective search space used: 16823042488
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)