BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13501 (UTR included)
(1762 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2254_C1 597 e-170
>BF14_2254_C1
Length = 1305
Score = 597 bits (301), Expect = e-170
Identities = 326/332 (98%), Gaps = 3/332 (0%)
Strand = Plus / Minus
Query: 1433 tagtacatctagtataatattttccttttctgatttttgtttatcccagtatagattggt 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 tagtacatctagtataatattttccttttctgatttttgtttatcccagtatagattggt 1246
Query: 1493 ttgttagctttcctaagactacataatatattaatctataatgccattaatttaaacgaa 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 ttgttagctttcctaagactacataatatattaatctataatgccattaatttaaacgaa 1186
Query: 1553 ctctacttatgtacttttaactcatttatgtgttcttggtcttatatccaaaaaaaaatg 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1185 ctctacttatgtacttttaactcatttatgtgttcttggtcttatatccaaaa-aaaatg 1127
Query: 1613 tatagatttcttta--tttttttttgatcaaatcgtattatttccttaaaattacggtaa 1670
|||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 1126 tatagatttctttattttttttttttatcaaatcgtattattttcttgaaattacggtaa 1067
Query: 1671 gtgtggatatttgtattgtaataagataattctgataaaactatcttgtttccaacaaca 1730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 gtgtggatatttgtattgtaataagataattctgataaaactatcttgtttccaacaaca 1007
Query: 1731 taactttctatttctgaagtggcatttatttt 1762
||||||||||||||||||||||||||||||||
Sbjct: 1006 taactttctatttctgaagtggcatttatttt 975
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,417
Number of extensions: 4727
Number of successful extensions: 4727
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4725
Number of HSP's successfully gapped: 1
Length of query: 1762
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1745
Effective length of database: 8,119,229
Effective search space: 14168054605
Effective search space used: 14168054605
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)