BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN13512 (UTR included)
(3652 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1G07 1039 0.0
BF01026A2A08 72 7e-12
>BF01033A1G07
Length = 686
Score = 1039 bits (524), Expect = 0.0
Identities = 544/550 (98%), Gaps = 1/550 (0%)
Strand = Plus / Plus
Query: 493 agtgcaccatgtcggc-tgtgatgagcaccctgtctatgatcagcggcggcaggagggcc 551
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agtgcaccatgtcgnnntgtgatgagcaccctgtctatgatcagcggcggcaggagggcc 196
Query: 552 catcgtaagctcaccaattcaagaaaatctggccagttctccgacgccggagaggacaga 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 catcgtaagctcaccaattcaagaaaatctggccagttctccgacgccggagaggacaga 256
Query: 612 acccgcagtcagcatgacctcaacaagcagcgctccgcctcactccaaaccctcgaggct 671
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 acccgcagtcagcatgacctcaacaagcaacgctccgcctcactccaaaccctcgaggct 316
Query: 672 ggaggggccatcaaccttgaaaccctggaggctaagatggcaagcatcgaggtctccctg 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ggaggggccatcaaccttgaaaccctggaggctaagatggcaagcatcgaggtctccctg 376
Query: 732 gcggggtcgcggcgccgcagtgcagcgggtcgtgacaccgcacgagacaacacgcgcgag 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gcggggtcgcggcgccgcagtgcagcgggtcgtgacaccgcacgagacaacacgcgcgag 436
Query: 792 ctggacgcgctgcgagccgctattaacgacaaggacatcctcatacagaatttaaagaaa 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctggacgcgctgcgagccgctattaacgacaaggacatcctcatacagaatttaaagaaa 496
Query: 852 cagttgagcgcttcactgagcgccgctcgcctgggcgtgcaggcgtcgtcccccgtcccg 911
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cagttaagcgcttcactgagcgccgctcgcctgggcgtgcaggcgtcgtcccccgtcccg 556
Query: 912 tactcaggtcgggaggacgctccggtgttgtcccctgaggaaagacgagccttggaggag 971
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 557 tactcaggtcgggaggacgctccggtgttgtcccccgaggaaagacgagccttggaggag 616
Query: 972 agagccgccgccgtccgctcagaccttgatgcgaggcgagctaacatacaggaactgaag 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agagccgccgccgtccgctcagaccttgatgcgaggcgagctaacatacaggaactgaag 676
Query: 1032 agaagattag 1041
||||||||||
Sbjct: 677 agaagattag 686
>BF01026A2A08
Length = 242
Score = 71.9 bits (36), Expect = 7e-12
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 3487 gcttagaattcgaagcaccgtcccaggttcacgtac 3522
||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcttagaattcgaagcaccgtcccaggttcacgtac 207
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 287,678
Number of extensions: 5554
Number of successful extensions: 5554
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5553
Number of HSP's successfully gapped: 2
Length of query: 3652
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3634
Effective length of database: 8,109,745
Effective search space: 29470813330
Effective search space used: 29470813330
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)